CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24659	Canola	cytosol	98.11	97.74
Bra029611.1-P	Field mustard	cytosol	97.74	97.55
AT3G06930.2	Thale cress	cytosol	89.06	88.22
CDY33934	Canola	cytosol	81.89	82.04
CDY05647	Canola	cytosol	81.7	81.85
CDX85389	Canola	cytosol	80.38	81.45
CDX86257	Canola	cytosol, plastid	79.62	80.69
PGSC0003DMT400021779	Potato	cytosol	58.3	75.18
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	69.81	70.48
KRH02253	Soybean	cytosol	70.75	70.09
KRH50844	Soybean	cytosol	69.81	69.03
GSMUA_Achr11P...	Banana	cytosol	59.62	68.25
KRH37109	Soybean	cytosol	68.87	67.97
KRH12054	Soybean	cytosol	69.62	67.83
Solyc12g099560.1.1	Tomato	extracellular	66.6	67.62
PGSC0003DMT400012001	Potato	plastid	66.04	67.18
Solyc05g054240.2.1	Tomato	cytosol	64.53	64.9
Os07t0671700-01	Rice	plasma membrane	64.53	64.77
GSMUA_Achr11P...	Banana	cytosol	65.85	64.63
EER97694	Sorghum	cytosol	64.53	63.33
TraesCS2B01G133300.3	Wheat	cytosol	63.77	63.3
TraesCS2A01G114100.1	Wheat	cytosol	63.96	63.25
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	61.7	61.58
Zm00001d007133_P002	Maize	cytosol	63.4	61.31
TraesCS2D01G114900.1	Wheat	cytosol	63.77	61.12
CDY27881	Canola	mitochondrion	21.51	46.72
Zm00001d022469_P001	Maize	plasma membrane	64.53	32.08
CDY35877	Canola	cytosol	20.94	30.58
CDX82711	Canola	cytosol	20.75	30.47
CDY14208	Canola	cytosol	18.68	30.09
CDY66138	Canola	cytosol, peroxisome, plastid	21.51	29.69
CDY30213	Canola	cytosol	21.51	29.16
CDY43510	Canola	cytosol	21.32	28.97
CDY47762	Canola	cytosol	21.13	28.87
CDY06802	Canola	cytosol	21.13	28.79
CDY03574	Canola	cytosol	15.47	28.57
CDY24566	Canola	cytosol	22.08	27.4
CDX82265	Canola	cytosol	21.7	27.06
CDY36064	Canola	cytosol	21.7	26.93
CDY25372	Canola	cytosol	21.7	26.93
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	11.7	24.31
CDY71180	Canola	cytosol	10.38	23.91
CDY51773	Canola	nucleus	38.11	22.52
CDY00764	Canola	cytosol	22.45	20.7
CDY08441	Canola	cytosol	23.21	20.6
CDX73828	Canola	cytosol	22.83	20.27
CDY42140	Canola	cytosol	22.08	19.86
CDY71161	Canola	cytosol	5.28	19.18
CDY42226	Canola	endoplasmic reticulum, extracellular	5.09	18.62
CDY49141	Canola	nucleus	7.17	13.52

Protein Annotations

MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	GO:A0A078EXI0	InterPro:Arg_MeTrfase	EnsemblPlants:CDY05299
ProteinID:CDY05299	ProteinID:CDY05299.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006479
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538
GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00120129001	InterPro:IPR025799	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EE50F2	SEG:seg	:

Description

BnaC05g45040D

Coordinates

chrLK031960:-:940523..943610

Molecular Weight (calculated)

59105.0 Da

IEP (calculated)

4.578

GRAVY (calculated)

-0.198

Length

530 amino acids

Sequence
(BLAST)

001: MEASPLKKLE QLEFSLDSVT DLSSSPPASP SSPAVATFSC VDGVTELRFL QPDSTHCFTF DLASAQLFKL GTVQFICVSD DNSEERSFSK GVNIKFGSEK
101: DSKEFCDSFE EWRKDALVPG SSIVSASNSK FDEKIEASSA KMYFHYYGQL LHQQNMLQDY VRTGTYYAAV MENRSDFAGR VVVDVGAGSG ILSMFAAQAG
201: AKHVYAVEAS EMAEYARKLI AGNPLFADRI TVIKGKVEDI ELPEKADILI SEPMGTLLVN ERMLESYVIA RDRFMSPNGK MFPTVGRIHM APFSDEFLFI
301: EMANKALFWQ QQNYYGVDLT PLFGSAHQGY FSQPVVDAFD PRLLVAPLMF HTIDFTQMKE EDFYEIDIPL KFTSSVCTRV HGLACWFDVL FDGSTVQRWL
401: TTAPGAPTTH WYQIRCVLAQ PIYVMAGQEI TGRLHLIAHS AQSYTIDLTL SAKMWGPGAS QGGILQSSTG KFDLKEPYYR MSQPQAYPAA QEPPLPPQPQ
501: LNPQQDIQIQ SDDFEEELLQ EPAQNASTQL

Best Arabidopsis Sequence Match ( AT3G06930.2 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQQ DIQTPNDELE EELLQQLPQN PSAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.