CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82265	Canola	cytosol	95.78	96.24
CDY25372	Canola	cytosol	92.97	92.97
CDY24566	Canola	cytosol	92.04	92.04
AT3G20020.3	Thale cress	cytosol	88.52	85.33
KRH17553	Soybean	cytosol	16.39	81.4
KRG89089	Soybean	nucleus	69.09	72.66
VIT_10s0071g00750.t01	Wine grape	cytosol	69.79	71.98
Solyc04g008860.2.1	Tomato	nucleus	71.66	71.0
GSMUA_AchrUn_...	Banana	cytosol, vacuole	8.43	70.59
KRH40914	Soybean	cytosol, plastid	41.22	68.22
GSMUA_AchrUn_...	Banana	cytosol	38.17	67.36
TraesCS1B01G185000.1	Wheat	peroxisome	44.03	64.38
OQU91600	Sorghum	cytosol	58.08	61.54
Os10t0489100-01	Rice	cytosol, nucleus	56.67	61.27
TraesCS1A01G171700.1	Wheat	cytosol	56.44	60.71
TraesCS2B01G590000.1	Wheat	mitochondrion	53.86	60.53
TraesCS1D01G172200.1	Wheat	cytosol	56.21	60.45
Zm00001d032633_P004	Maize	mitochondrion	56.67	60.05
TraesCS2A01G554100.1	Wheat	mitochondrion	54.8	59.85
EES11648	Sorghum	mitochondrion	54.33	59.79
TraesCS2D01G560200.1	Wheat	mitochondrion	54.8	59.54
Zm00001d026614_P001	Maize	mitochondrion	53.4	58.91
KRG90589	Soybean	cytosol, plastid	55.74	58.19
KRH11256	Soybean	endoplasmic reticulum	41.92	57.93
Os04t0677066-00	Rice	nucleus	52.22	56.74
HORVU1Hr1G044440.3	Barley	plastid	55.97	56.5
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	32.55	54.51
HORVU2Hr1G119480.1	Barley	cytosol	48.01	54.23
GSMUA_Achr5P10840_001	Banana	cytosol	51.05	49.89
GSMUA_Achr5P10850_001	Banana	cytosol, golgi, plastid	38.17	49.39
CDY42226	Canola	endoplasmic reticulum, extracellular	14.75	43.45
CDX82711	Canola	cytosol	31.62	37.4
CDY06802	Canola	cytosol	33.96	37.28
CDY35877	Canola	cytosol	31.62	37.19
CDY14208	Canola	cytosol	28.57	37.08
CDY43510	Canola	cytosol	33.72	36.92
CDY47762	Canola	cytosol	33.02	36.34
CDY66138	Canola	cytosol, peroxisome, plastid	32.32	35.94
CDY30213	Canola	cytosol	32.79	35.81
CDY03574	Canola	cytosol	23.65	35.19
CDY71161	Canola	cytosol	9.6	28.08
CDY71180	Canola	cytosol	14.99	27.83
CDY00764	Canola	cytosol	33.26	24.7
CDX73828	Canola	cytosol	33.96	24.29
CDY08441	Canola	cytosol	33.26	23.79
CDY42140	Canola	cytosol	32.79	23.77
CDY27881	Canola	mitochondrion	13.35	23.36
CDX86257	Canola	cytosol, plastid	26.93	21.99
CDY24659	Canola	cytosol	27.17	21.8
CDY05299	Canola	cytosol	26.93	21.7
CDX85389	Canola	cytosol	26.46	21.61
CDY33934	Canola	cytosol	26.7	21.55
CDY05647	Canola	cytosol	26.7	21.55
CDY49141	Canola	nucleus	8.2	12.46
CDY51773	Canola	nucleus	23.42	11.15

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:A0A078HF95	UniProt:A0A078HF95	InterPro:Arg_MeTrfase	EnsemblPlants:CDY36064
ProteinID:CDY36064	ProteinID:CDY36064.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006479
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538
GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00059893001	InterPro:IPR025799	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF70	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EE8ECB	SEG:seg	:

Description

BnaC03g41340DBnaC03g41340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF95]

Coordinates

chrLK032366:+:287041..291118

Molecular Weight (calculated)

47420.0 Da

IEP (calculated)

5.884

GRAVY (calculated)

-0.370

Length

427 amino acids

Sequence
(BLAST)

001: MQSGGDYSNG FHGEVEKQLP GLSSFGRAKR RSRGVAHDPR GGLTNGVRVS DQLGEQKPLE TQKSPPPCTD FDVAYFHSYA HVGIHEEMIK DRARTETYKE
101: AIMQHQSFIQ GKVVVDVGCG TGILSIFCAQ AGAKRVYAVD ASDIAVQANE VVKANGLSDK VIVLHGRVED VEIDEEVDVI ISEWMGYMLL YESMLGSVIT
201: ARDRWLKPGG LILPSHATLY MAPVSHPDRY SHSIDFWRNV YGIDMSAMMQ LAKQCAFEEP SVESISGENV LTWPEVVKHI DCQTVKIQEL DSVTARYKFK
301: SMMRAPMHGF GFWFDVEFSE PASSPAKTTS ATSVDGGSSS MSPSREGNQK KRSNPSDALV LSTSPEAPPT HWQQTIVYFY DPIDVEQDQV IEGSVTLSQS
401: KENRRFMNIH LEYSSAGRSF VKESVMR

Best Arabidopsis Sequence Match ( AT3G20020.1 )
(BLAST)

001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSSAGRSFVK ESVMR

Arabidopsis Description

ATPRMT6PRMT6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.