CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001445.1-P	Field mustard	cytosol	47.91	95.65
CDY00764	Canola	cytosol	90.62	94.09
CDY42140	Canola	cytosol	80.9	82.0
CDY08441	Canola	cytosol	81.91	81.91
AT3G12270.1	Thale cress	cytosol	79.4	78.87
CDY49141	Canola	nucleus	33.33	70.82
Os07t0640000-01	Rice	cytosol	39.2	58.06
Zm00001d014027_P001	Maize	cytosol	16.92	54.3
KRH30091	Soybean	nucleus	54.77	52.49
KRH62812	Soybean	cytosol	54.1	51.27
VIT_13s0084g00650.t01	Wine grape	cytosol	53.94	51.19
Solyc01g096550.2.1	Tomato	cytosol	51.59	49.28
PGSC0003DMT400008488	Potato	nucleus	51.42	49.28
TraesCS2D01G151900.1	Wheat	cytosol	48.58	48.01
TraesCS2B01G172600.1	Wheat	cytosol	48.24	47.92
TraesCS2A01G147100.1	Wheat	cytosol	48.24	47.92
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.76	47.18
Zm00001d019697_P001	Maize	cytosol	47.91	46.89
EER96428	Sorghum	cytosol	48.24	46.83
HORVU2Hr1G026200.11	Barley	cytosol	47.07	45.62
CDX82711	Canola	cytosol	22.45	37.12
CDY35877	Canola	cytosol	22.28	36.64
CDY24566	Canola	cytosol	25.13	35.13
CDY06802	Canola	cytosol	22.45	34.45
CDY25372	Canola	cytosol	24.62	34.43
CDY43510	Canola	cytosol	22.45	34.36
CDY14208	Canola	cytosol	18.93	34.35
CDY47762	Canola	cytosol	22.11	34.02
CDY36064	Canola	cytosol	24.29	33.96
CDY03574	Canola	cytosol	16.25	33.8
CDY30213	Canola	cytosol	22.11	33.76
CDX82265	Canola	cytosol	23.62	33.18
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	13.07	30.59
CDY66138	Canola	cytosol, peroxisome, plastid	19.1	29.69
CDY27881	Canola	mitochondrion	10.72	26.23
CDY42226	Canola	endoplasmic reticulum, extracellular	6.37	26.21
CDY33934	Canola	cytosol	20.44	23.06
CDY71180	Canola	cytosol	8.88	23.04
CDX85389	Canola	cytosol	20.1	22.94
CDY24659	Canola	cytosol	20.44	22.93
CDY05299	Canola	cytosol	20.27	22.83
CDX86257	Canola	cytosol, plastid	19.93	22.75
CDY05647	Canola	cytosol	20.1	22.68
CDY71161	Canola	cytosol	4.69	19.18
CDY51773	Canola	nucleus	20.44	13.6
Os07t0640100-01	Rice	mitochondrion	0.5	2.29

Protein Annotations

MapMan:17.1.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	GO:A0A078CFN3	InterPro:Arg_MeTrfase	EnsemblPlants:CDX73828
ProteinID:CDX73828	ProteinID:CDX73828.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0005488	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00111527001	InterPro:IPR013087	InterPro:IPR025799
PFAM:PF13649	ScanProsite:PS00028	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF89	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	SUPFAM:SSF57667	TMHMM:TMhelix	UniParc:UPI0004EE5872	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
SEG:seg	:	:	:	:	:

Description

BnaA03g32190D

Coordinates

chrLK031800:-:102228..104496

Molecular Weight (calculated)

66434.0 Da

IEP (calculated)

4.221

GRAVY (calculated)

-0.162

Length

597 amino acids

Sequence
(BLAST)

001: MAAAATKMVK NELLSHSDDD DTEENFSEDG DWGDWEEAGV EEDGDVSESD FLCLFCDAHY VSCALLFEHC RVSHGFDFHG VRKELKLDFY SSFKLINYVR
101: SQVSCFLCFL CSIWFLYVLL VFPVMQSFSV DVKDVNFPWD DEKYLKPFWQ EDSLLYSFAD DEEEEEEEEE EALDRESLIE DLQKLGDLSI DDVSVNKDVT
201: LISNKQSCVD GLVVVNGKDE EARVCDGRLA GRNIRKVNEN YFGSYSSFGI HKEMISDKVR TEAYRDALLK NPSLLAGSVV MDVGCGTGIL SLFAAQAGAS
301: RVVAVEASEK MAKVATKIAK DNKVFNDNEH NGVLEVAHSM VEELENSIQI QPHSVDVLVS EWMGYCLLYE SMLSSVLYAR DRWLKPGGAI LPDTATMFVA
401: GFGKGATSLP FWEDVYGFDM SSIGKEILED TTRIPVVDVI EGRDLVTGPA LLKAFDLATM KPDEVDFTET ATLEPIESET EAKLCHGVVL WFDTGFTDRF
501: CKENPTLLST SPYTPPTHWA QTVLTFQEPI SLAPDTVLAG ADRSGAIGTE ESPASSIHLR VSVARASEHR SIDVSLEATG VSSKGQKRRW PVQIFNL

Best Arabidopsis Sequence Match ( AT3G12270.1 )
(BLAST)

001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L

Arabidopsis Description

PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.