Factsheet for TraesCS2D01G151900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G147100.1	Wheat	cytosol	95.53	96.01
TraesCS2B01G172600.1	Wheat	cytosol	91.89	92.35
HORVU2Hr1G026200.11	Barley	cytosol	84.44	82.79
Os07t0640000-01	Rice	cytosol	54.97	82.38
Zm00001d014027_P001	Maize	cytosol	23.68	76.88
EER96428	Sorghum	cytosol	74.5	73.17
Zm00001d019697_P001	Maize	cytosol	73.34	72.62
Bra001445.1-P	Field mustard	cytosol	27.65	55.85
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.79	51.45
CDY42140	Canola	cytosol	49.83	51.1
Bra034765.1-P	Field mustard	cytosol	49.83	50.76
VIT_13s0084g00650.t01	Wine grape	cytosol	52.48	50.4
CDY08441	Canola	cytosol	49.5	50.08
KRH30091	Soybean	nucleus	51.49	49.92
AT3G12270.1	Thale cress	cytosol	49.67	49.92
CDY00764	Canola	cytosol	47.52	49.91
Solyc01g096550.2.1	Tomato	cytosol	51.32	49.6
PGSC0003DMT400008488	Potato	nucleus	50.99	49.44
KRH62812	Soybean	cytosol	50.99	48.89
CDX73828	Canola	cytosol	48.01	48.58
CDY49141	Canola	nucleus	18.21	39.15
TraesCS5D01G195000.1	Wheat	cytosol	20.86	33.16
TraesCS2D01G560200.1	Wheat	mitochondrion	21.52	33.08
TraesCS1D01G172200.1	Wheat	cytosol	21.03	31.99
TraesCS7D01G086300.1	Wheat	cytosol	18.38	29.37
TraesCS2D01G114900.1	Wheat	cytosol	18.71	20.43
Os07t0640100-01	Rice	mitochondrion	0.5	2.29

Protein Annotations

MapMan:17.1.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	InterPro:IPR025799	PFAM:PF13649	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF89	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	SUPFAM:SSF57667	EnsemblPlantsGene:TraesCS2D01G151900	EnsemblPlants:TraesCS2D01G151900.1
InterPro:Znf_C2H2_sf	TIGR:cd02440	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:-:95410374..95413520

Molecular Weight (calculated)

65501.2 Da

IEP (calculated)

4.262

GRAVY (calculated)

-0.255

Length

604 amino acids

Sequence
(BLAST)

001: MATQARELPP KQELPRDDGD DYEDDEDEEE EEGEEGWDDW ESDGDDAAGG SGGLLCLFCS ARFDSDGPLF AHCGSVHGFD FHKLVRELGL DFYGCIKLIN
101: FVRSKVAENK CWSCAEISQL EGKVPWAEDS YLKPFMEDDS LLHSLSIFDD EEDEDCGMPV VTGECSVGNG RSGELQGNGL NTIIDDCSDI SARFEKAVTT
201: ESNGGDNNGS LSEEQTDRQL KITRASVTAK EIKKVDDNYF GSYSSFGIHR EMLGDKVRTD AYRDALLDNP SLMNGATVLD VGCGTGILSL FAAKAGASRV
301: VAVDGSAKMS SVATHVAKNN GLLYDENANT EQKGGPQVIS VVHTKAEELN HKIVVPPNGF DVLVSEWMGY CLLYESMLSS VIYARDHFLK PGGAILPDTA
401: TILGAGFGRG GTSLPFWENV YGFDMSCIGK EVTGSSARFP VVDVLDSKDV VTDTAVLHYF DLATMKESEM DFTASLELRL PESGAAAVAG VTWCHGIVLW
501: FDTGFTDRFC KDKPVVLSTS PFSTPTHWSQ TIFTFEEPIA ITNEKSVVGS SASVGSAECP AGTIRSRISI VRASEHRSID ISIETTGISS DGRKRSWPAQ
601: IFNL

Best Arabidopsis Sequence Match ( AT3G12270.1 )
(BLAST)

001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L

Arabidopsis Description

PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.