CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019697_P001	Maize	cytosol	90.73	91.48
Os07t0640000-01	Rice	cytosol	54.63	83.37
Zm00001d014027_P001	Maize	cytosol	24.88	82.26
TraesCS2B01G172600.1	Wheat	cytosol	72.85	74.54
TraesCS2D01G151900.1	Wheat	cytosol	73.17	74.5
TraesCS2A01G147100.1	Wheat	cytosol	72.68	74.38
HORVU2Hr1G026200.11	Barley	cytosol	70.41	70.29
Bra001445.1-P	Field mustard	cytosol	27.32	56.19
KRH30091	Soybean	nucleus	52.85	52.17
KRH62812	Soybean	cytosol	52.85	51.59
VIT_13s0084g00650.t01	Wine grape	cytosol	52.36	51.19
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.31	50.99
PGSC0003DMT400008488	Potato	nucleus	51.54	50.88
CDY42140	Canola	cytosol	48.46	50.59
CDY00764	Canola	cytosol	46.83	50.09
Solyc01g096550.2.1	Tomato	cytosol	50.89	50.08
AT3G12270.1	Thale cress	cytosol	48.46	49.58
Bra034765.1-P	Field mustard	cytosol	47.8	49.58
CDY08441	Canola	cytosol	47.8	49.25
CDX73828	Canola	cytosol	46.83	48.24
CDY49141	Canola	nucleus	16.91	37.01
EER98789	Sorghum	cytosol	21.63	34.64
EES11648	Sorghum	mitochondrion	20.65	32.73
OQU91600	Sorghum	cytosol	20.33	31.02
EER87820	Sorghum	cytosol	16.91	27.44
EER97694	Sorghum	cytosol	17.89	20.37
Os07t0640100-01	Rice	mitochondrion	0.49	2.29

Protein Annotations

MapMan:17.1.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	EntrezGene:8063423	InterPro:Arg_MeTrfase	UniProt:C5X7D9
EnsemblPlants:EER96428	ProteinID:EER96428	ProteinID:EER96428.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008469	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0019538	GO:GO:0019919	GO:GO:0032259	GO:GO:0034969	GO:GO:0035242	InterPro:IPR025799
PFAM:PF12756	PFAM:PF13649	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF89	InterPro:SAM-dependent_MTases
EnsemblPlantsGene:SORBI_3002G145300	SUPFAM:SSF53335	SUPFAM:SSF57667	UniParc:UPI0001A836FE	RefSeq:XP_002459907.1	InterPro:Znf_C2H2_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:27614736..27631416

Molecular Weight (calculated)

67368.4 Da

IEP (calculated)

4.271

GRAVY (calculated)

-0.262

Length

615 amino acids

Sequence
(BLAST)

001: MEPSPADKEE VEAEEPLRSE EEEEDEEEGE EGWDDWCSDG EDVGGGLLCL FCSSRFDAEN SLFEHCAAEH CFDFHRIVKE LGLDFYSCIK LINFARSKVA
101: EKKCWSCGQA FSSNTELCSH LHAVENYQIE GKVPWEDDVY LKPFMEDDSL LHSLSIDDDD DEDEDCGMSM ERGQCSAGNG VLAEPPGNTL RTISERNGSD
201: ISPQFHQECT VGSTQGEDRE SLAHEMNDSH LKVARASVNA KAIKTVDDNY FGSYSSFGIH REMLGDKVRT DAYRDAILGN PSLLSGATVL DVGCGTGILS
301: LFAAKAGASR VVSVDGSAKM ASVATQVAKN NGLLYDENVK AEQKQGSAQV ISVVHTKAEE LNQKIQVPQN GFDVLVSEWM GYCLLYESML SSVLYARDHF
401: LKPGGAILPD TATILGAGFG KGGTSLPFWE NVYGFDMSCI GKEVTSSSAR FPVVDVLSSQ DIVTETAVLH SFDLASMKES EMDFTASFEL RLSESSATVP
501: GVTWCYGIVL WFDTGFTNRF CKEKPVVLST SPYVTPTHWS QTIFTFEEPI AMAKEESALG SSASAGTDEC PATMLRSRIS IVRASEHRSI DISVETTAIS
601: SVGWKRSWPV QIFNL

Best Arabidopsis Sequence Match ( AT3G12270.1 )
(BLAST)

001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L

Arabidopsis Description

PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.