CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73828	Canola	cytosol	94.09	90.62
CDY08441	Canola	cytosol	83.83	80.74
CDY42140	Canola	cytosol	82.26	80.31
AT3G12270.1	Thale cress	cytosol	80.7	77.2
CDY49141	Canola	nucleus	33.57	68.68
Os07t0640000-01	Rice	cytosol	40.17	57.32
Zm00001d014027_P001	Maize	cytosol	17.39	53.76
KRH30091	Soybean	nucleus	56.17	51.85
KRH62812	Soybean	cytosol	55.65	50.79
VIT_13s0084g00650.t01	Wine grape	cytosol	55.13	50.4
Solyc01g096550.2.1	Tomato	cytosol	52.17	48.0
PGSC0003DMT400008488	Potato	nucleus	52.0	47.99
TraesCS2D01G151900.1	Wheat	cytosol	49.91	47.52
TraesCS2B01G172600.1	Wheat	cytosol	49.57	47.42
TraesCS2A01G147100.1	Wheat	cytosol	49.39	47.25
Zm00001d019697_P001	Maize	cytosol	49.74	46.89
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.39	46.87
EER96428	Sorghum	cytosol	50.09	46.83
HORVU2Hr1G026200.11	Barley	cytosol	48.52	45.29
CDX82711	Canola	cytosol	23.13	36.84
CDY35877	Canola	cytosol	22.96	36.36
CDY06802	Canola	cytosol	23.48	34.7
CDY43510	Canola	cytosol	23.48	34.62
CDY24566	Canola	cytosol	25.57	34.43
CDY14208	Canola	cytosol	19.65	34.35
CDY47762	Canola	cytosol	22.96	34.02
CDY03574	Canola	cytosol	16.87	33.8
CDY30213	Canola	cytosol	22.96	33.76
CDY25372	Canola	cytosol	25.04	33.72
CDY36064	Canola	cytosol	24.7	33.26
CDX82265	Canola	cytosol	24.0	32.47
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	13.57	30.59
CDY66138	Canola	cytosol, peroxisome, plastid	19.65	29.43
CDY27881	Canola	mitochondrion	11.13	26.23
CDY42226	Canola	endoplasmic reticulum, extracellular	6.26	24.83
CDX85389	Canola	cytosol	21.04	23.14
CDX86257	Canola	cytosol, plastid	20.7	22.75
CDY05647	Canola	cytosol	20.87	22.68
CDY33934	Canola	cytosol	20.87	22.68
CDY24659	Canola	cytosol	20.87	22.56
CDY05299	Canola	cytosol	20.7	22.45
CDY71180	Canola	cytosol	8.87	22.17
CDY71161	Canola	cytosol	4.7	18.49
CDY51773	Canola	nucleus	20.87	13.38
Os07t0640100-01	Rice	mitochondrion	0.52	2.29

Protein Annotations

MapMan:17.1.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	GO:A0A078EJ11	InterPro:Arg_MeTrfase	EnsemblPlants:CDY00764
ProteinID:CDY00764	ProteinID:CDY00764.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0005488	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00110645001	InterPro:IPR013087	InterPro:IPR025799
PFAM:PF13649	ScanProsite:PS00028	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF89	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	SUPFAM:SSF57667	UniParc:UPI0004EDD9F8	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg

Description

BnaC03g37480D

Coordinates

chrLK031921:+:1031771..1034115

Molecular Weight (calculated)

63760.5 Da

IEP (calculated)

4.149

GRAVY (calculated)

-0.222

Length

575 amino acids

Sequence
(BLAST)

001: MAAAATKMVK NELISHSDDD DTEENFSEDG DWADWEAGVE EDGDGSESDF LCLFCDSHFV SCALLFEHCR VSHAFDFHGV RKELKLDFYS SFKLINFVRS
101: QVAENKAVDV KDVNFPWDDE KYLKPFWQED SLLYSFADDE EEEEEEEEEG LDREGLMEDL QKLGDLSIDD VSVNKDVTLI SNKQSCVDGL VVVNGKDEEA
201: RVCDERLAGR NVRKVNENYF GSYSSFGIHK EMISDKVRTE AYRDALLKNP SLLSGSVVMD VGCGTGILSL FAAQAGASRV VAVEASEKMA KVATKIAKDN
301: KVFNDCEHNG VLEVAQSMVE ELENSIQIQP QSVDVLVSEW MGYCLLYESM LTSVLYARDR WLKPGGAILP DTATMFVAGF GKGATSLPFW EDVYGFDMSL
401: IGKEVLEDTA RIPVVDVIED RDLVTGPALL KAFDLATMKP DEVDFTETAT LEPIESETEA RLCHGVVLWF DTGFTDRFCK ENPTVLSASP YTPPTHWAQT
501: VLTFQEPISL APDTVLSGAD RSGAIGTEES PASSIHLRVS VARASEHRSI DVSLEATGVS LNGQKRCWLV QIFNL

Best Arabidopsis Sequence Match ( AT3G12270.1 )
(BLAST)

001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L

Arabidopsis Description

PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.