Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14208 | Canola | cytosol | 82.93 | 72.34 |
| CDY43510 | Canola | cytosol | 89.55 | 65.9 |
| CDY06802 | Canola | cytosol | 89.2 | 65.81 |
| CDY30213 | Canola | cytosol | 89.55 | 65.73 |
| CDY47762 | Canola | cytosol | 88.85 | 65.72 |
| AT4G29510.1 | Thale cress | cytosol | 86.41 | 63.59 |
| Zm00001d020188_P001 | Maize | extracellular | 67.25 | 63.07 |
| CDX82711 | Canola | cytosol | 76.31 | 60.66 |
| CDY35877 | Canola | cytosol | 75.61 | 59.78 |
| VIT_11s0016g02530.t01 | Wine grape | cytosol | 71.08 | 58.29 |
| KRH74166 | Soybean | nucleus | 74.22 | 56.65 |
| KRH49040 | Soybean | nucleus | 74.22 | 56.2 |
| Os09t0359800-01 | Rice | cytosol | 73.87 | 54.78 |
| EER98789 | Sorghum | cytosol | 73.17 | 54.69 |
| TraesCS5A01G196000.2 | Wheat | cytosol | 72.13 | 54.47 |
| TraesCS5B01G187400.1 | Wheat | cytosol | 72.13 | 54.47 |
| TraesCS5D01G195000.1 | Wheat | cytosol | 71.78 | 54.21 |
| HORVU5Hr1G056790.7 | Barley | cytosol | 72.13 | 54.05 |
| Solyc07g032240.2.1 | Tomato | cytosol | 69.34 | 53.07 |
| GSMUA_Achr6P22570_001 | Banana | cytosol | 71.43 | 52.84 |
| PGSC0003DMT400000915 | Potato | cytosol | 71.43 | 51.77 |
| Solyc12g008760.1.1 | Tomato | cytosol | 71.43 | 51.77 |
| PGSC0003DMT400021726 | Potato | cytosol | 70.03 | 50.38 |
| Bra010325.1-P | Field mustard | cytosol | 29.27 | 48.84 |
| CDY24566 | Canola | cytosol | 36.24 | 24.36 |
| CDY25372 | Canola | cytosol | 35.89 | 24.12 |
| CDY36064 | Canola | cytosol | 35.19 | 23.65 |
| CDX82265 | Canola | cytosol | 34.84 | 23.53 |
| CDY66138 | Canola | cytosol, peroxisome, plastid | 28.57 | 21.35 |
| CDY33443 | Canola | cytosol, endoplasmic reticulum, peroxisome | 15.68 | 17.65 |
| CDY27881 | Canola | mitochondrion | 14.98 | 17.62 |
| CDY71161 | Canola | cytosol | 8.71 | 17.12 |
| CDY00764 | Canola | cytosol | 33.8 | 16.87 |
| CDY42140 | Canola | cytosol | 34.49 | 16.81 |
| CDY08441 | Canola | cytosol | 34.49 | 16.58 |
| CDX73828 | Canola | cytosol | 33.8 | 16.25 |
| CDY33934 | Canola | cytosol | 29.62 | 16.07 |
| CDY05647 | Canola | cytosol | 29.62 | 16.07 |
| CDX86257 | Canola | cytosol, plastid | 29.27 | 16.06 |
| CDX85389 | Canola | cytosol | 28.92 | 15.87 |
| CDY05299 | Canola | cytosol | 28.57 | 15.47 |
| CDY24659 | Canola | cytosol | 28.57 | 15.41 |
| CDY71180 | Canola | cytosol | 10.1 | 12.61 |
| CDY42226 | Canola | endoplasmic reticulum, extracellular | 6.27 | 12.41 |
| CDY51773 | Canola | nucleus | 21.95 | 7.02 |
| CDY49141 | Canola | nucleus | 3.48 | 3.56 |
Protein Annotations
| Gene3D:2.70.160.11 | Gene3D:3.40.50.150 | MapMan:35.1 | GO:A0A078ESE6 | InterPro:Arg_MeTrfase | EnsemblPlants:CDY03574 |
| ProteinID:CDY03574 | ProteinID:CDY03574.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006479 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00116310001 | InterPro:IPR025799 | PFscan:PS51678 | PANTHER:PTHR11006 | PANTHER:PTHR11006:SF53 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | UniParc:UPI0004EF3370 | : | : | : | : |
Description
BnaC03g68330D
Coordinates
chrLK031944:-:489913..491573
Molecular Weight (calculated)
32443.8 Da
IEP (calculated)
5.176
GRAVY (calculated)
-0.156
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNNGDEVAQ DESMCDAGES TNAYFDSYSH FGNFPFQCVF LLVSAGASHV YAVTQWIKSD VITVLKGKIE EIELSIPKVD VIISEWMGYF LLFENMLDSV
101: LYARNKWLVD GGGVLPDKAS LFLTAIEDSE YKENKIEFWN SVYGFDMSCI KKKAMMEPLV DTVDPKLITM DISKMSSGDA SFTAPFKLVA QRNDYIHALV
201: AYFDVSFTMC HKLLGFSTGP KSRATHWKQT VMYLEDVLTI CEGETITGSM SVSYNNKKNP RDVDIKLSYS LDGQHSKISR TQHYKMR
101: LYARNKWLVD GGGVLPDKAS LFLTAIEDSE YKENKIEFWN SVYGFDMSCI KKKAMMEPLV DTVDPKLITM DISKMSSGDA SFTAPFKLVA QRNDYIHALV
201: AYFDVSFTMC HKLLGFSTGP KSRATHWKQT VMYLEDVLTI CEGETITGSM SVSYNNKKNP RDVDIKLSYS LDGQHSKISR TQHYKMR
001: MTSTENNNNG SDETQTTKLH FEDADESMHD GDDNNADVAD DITSADYYFD SYSHFGIHEE MLKDVVRTKS YQDVIYKNKF LIKDKIVLDV GAGTGILSLF
101: CAKAGAAHVY AVECSQMADT AKEIVKSNGF SDVITVLKGK IEEIELPVPK VDVIISEWMG YFLLYENMLD TVLYARNKWL VDGGIVLPDK ASLYVTAIED
201: AHYKDDKVEF WDDVYGFDMS CIKRRAITEP LVDTVDGNQI VTDSKLLKTM DISKMAAGDA SFTAPFKLVA QRNDHIHALV AYFDVSFTMC HKKMGFSTGP
301: KSRATHWKQT VLYLEDVLTI CEGETITGSM TIAQNKKNPR DVDIKLSYSL NGQHCNISRT HFYKMR
101: CAKAGAAHVY AVECSQMADT AKEIVKSNGF SDVITVLKGK IEEIELPVPK VDVIISEWMG YFLLYENMLD TVLYARNKWL VDGGIVLPDK ASLYVTAIED
201: AHYKDDKVEF WDDVYGFDMS CIKRRAITEP LVDTVDGNQI VTDSKLLKTM DISKMAAGDA SFTAPFKLVA QRNDHIHALV AYFDVSFTMC HKKMGFSTGP
301: KSRATHWKQT VLYLEDVLTI CEGETITGSM TIAQNKKNPR DVDIKLSYSL NGQHCNISRT HFYKMR
Arabidopsis Description
PRMT12Probable protein arginine N-methyltransferase 1.2 [Source:UniProtKB/Swiss-Prot;Acc:O82210]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.