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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2B01G578600.1
TraesCS4B01G122500.1
TraesCS5A01G196000.2
TraesCS5B01G187400.1
TraesCS5D01G195000.1
TraesCS6A01G195300.1
TraesCS6A01G400300.1
TraesCS6B01G440500.1
TraesCS6D01G118100.1
TraesCS6D01G384500.1
TraesCS7A01G479900.1
TraesCS7B01G382200.1
TraesCS7D01G467000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G19670.1 TraesCS2B01G578600.1 AT4G25630.1 17666011
AT2G19670.1 TraesCS4B01G122500.1 AT4G25630.1 17666011
AT2G19670.1 TraesCS6A01G195300.1 AT4G25630.1 17666011
AT2G19670.1 TraesCS6A01G400300.1 AT4G25630.1 17666011
AT2G19670.1 TraesCS6B01G440500.1 AT4G25630.1 17666011
AT2G19670.1 TraesCS6D01G118100.1 AT4G25630.1 17666011
AT2G19670.1 TraesCS6D01G384500.1 AT4G25630.1 17666011
AT2G19670.1 TraesCS7A01G479900.1 AT4G25630.1 17666011
AT2G19670.1 TraesCS7B01G382200.1 AT4G25630.1 17666011
AT2G19670.1 TraesCS7D01G467000.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS2B01G578600.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS4B01G122500.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS6A01G195300.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS6A01G400300.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS6B01G440500.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS6D01G118100.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS6D01G384500.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS7A01G479900.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS7B01G382200.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS7D01G467000.1 AT4G25630.1 17666011
AT4G29510.1 TraesCS5A01G196000.2 AT4G29510.1 17666011
AT4G29510.1 TraesCS5B01G187400.1 AT4G29510.1 17666011
AT4G29510.1 TraesCS5D01G195000.1 AT4G29510.1 17666011
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G195000.1 Wheat cytosol 99.74 99.74
TraesCS5B01G187400.1 Wheat cytosol 99.74 99.74
HORVU5Hr1G056790.7 Barley cytosol 98.68 97.91
Zm00001d020188_P001 Maize extracellular 71.58 88.89
Os09t0359800-01 Rice cytosol 89.47 87.86
EER98789 Sorghum cytosol 86.84 85.94
VIT_11s0016g02530.t01 Wine grape cytosol 74.21 80.57
KRH74166 Soybean nucleus 75.79 76.6
KRH49040 Soybean nucleus 76.32 76.52
GSMUA_Achr6P22570_001 Banana cytosol 77.89 76.29
CDX82711 Canola cytosol 71.84 75.62
CDY35877 Canola cytosol 71.58 74.93
Bra039010.1-P Field mustard cytosol 71.58 74.93
Solyc07g032240.2.1 Tomato cytosol 73.68 74.67
AT2G19670.1 Thale cress cytosol 71.58 74.32
AT4G29510.1 Thale cress cytosol 76.05 74.1
Bra011118.1-P Field mustard cytosol 75.79 73.85
CDY43510 Canola cytosol 75.79 73.85
CDY06802 Canola cytosol 75.53 73.78
CDY14208 Canola cytosol 63.68 73.56
Bra024143.1-P Field mustard cytosol 74.47 72.75
Solyc12g008760.1.1 Tomato cytosol 75.79 72.73
CDY47762 Canola cytosol 74.21 72.68
PGSC0003DMT400000915 Potato cytosol 75.53 72.47
CDY03574 Canola cytosol 54.47 72.13
CDY30213 Canola cytosol 73.68 71.61
PGSC0003DMT400021726 Potato cytosol 74.21 70.68
Bra010325.1-P Field mustard cytosol 31.32 69.19
TraesCS1A01G171700.1 Wheat cytosol 35.79 34.26
TraesCS2A01G554100.1 Wheat mitochondrion 35.0 34.02
TraesCS7A01G090500.1 Wheat cytosol 29.47 29.4
TraesCS4A01G390400.1 Wheat cytosol 29.21 29.37
TraesCS2A01G147100.1 Wheat cytosol 33.95 21.46
TraesCS2A01G114100.1 Wheat cytosol 29.21 20.71
Protein Annotations
MapMan:12.3.4.1Gene3D:2.70.160.11Gene3D:3.40.50.150InterPro:Arg_MeTrfaseGO:GO:0003674GO:GO:0003824
GO:GO:0006464GO:GO:0006479GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0009987
GO:GO:0016740GO:GO:0019538InterPro:IPR025799PFAM:PF06325PFscan:PS51678PANTHER:PTHR11006
PANTHER:PTHR11006:SF53InterPro:SAM-dependent_MTasesSUPFAM:SSF53335EnsemblPlantsGene:TraesCS5A01G196000EnsemblPlants:TraesCS5A01G196000.2TIGR:cd02440
SEG:seg:::::
Description
No Description!
Coordinates
chr5A:+:398935173..398938773
Molecular Weight (calculated)
42573.9 Da
IEP (calculated)
5.093
GRAVY (calculated)
-0.241
Length
380 amino acids
Sequence
(BLAST)
001: MDRRKGSGSR DANGGLAEAT ASRLRFEDAD EVAGEVGMEV EESPAAPGEE VIGNDKTSAD YYFDSYSHFG IHEEMLKDVV RTRSYQNVIT QNNFLFKDKI
101: VLDVGAGTGI LSLFCAKAGA KHVYAIECSQ MADMAKEIVK TNGFSEVITV IKGKVEEIEL PVPKVDVIIS EWMGYFLLFE NMLDTVLFAR DKWLADDGVV
201: LPDKASLHLT AIEDAEYKED KIEFWNNVYG FDMSCIKKQA MMEPLVDTVD QNQIVTNCQL LKTMDISKMS SGDASFTVPF KLVAERNDFI HALVAYFNVS
301: FTKCHKLMGF STGPRSKSTH WKQTVLYLED VVTICEGETL SGSMTVANNK KNPRDIDITL KYAINGNRCK VSRTQHYKMR
Best Arabidopsis Sequence Match ( AT4G29510.1 )
(BLAST)
001: MTKNSNHDEN EFISFEPNQN TKIRFEDADE DEVAEGSGVA GEETPQDESM FDAGESADTA EVTDDTTSAD YYFDSYSHFG IHEEMLKDVV RTKTYQNVIY
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR
Arabidopsis Description
PRMT11Protein arginine N-methyltransferase 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU94]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.