CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039010.1-P	Field mustard	cytosol	99.72	99.72
CDX82711	Canola	cytosol	97.25	97.78
AT2G19670.1	Thale cress	cytosol	91.46	90.71
Zm00001d020188_P001	Maize	extracellular	66.12	78.43
CDY06802	Canola	cytosol	83.47	77.89
CDY43510	Canola	cytosol	83.47	77.69
CDY14208	Canola	cytosol	69.97	77.2
CDY30213	Canola	cytosol	82.64	76.73
CDY47762	Canola	cytosol	81.54	76.29
VIT_11s0016g02530.t01	Wine grape	cytosol	73.28	76.0
CDY03574	Canola	cytosol	59.78	75.61
KRH49040	Soybean	nucleus	77.69	74.41
KRH74166	Soybean	nucleus	76.86	74.2
TraesCS5B01G187400.1	Wheat	cytosol	74.93	71.58
TraesCS5A01G196000.2	Wheat	cytosol	74.93	71.58
Solyc07g032240.2.1	Tomato	cytosol	73.83	71.47
TraesCS5D01G195000.1	Wheat	cytosol	74.66	71.32
Os09t0359800-01	Rice	cytosol	75.76	71.06
HORVU5Hr1G056790.7	Barley	cytosol	74.93	71.02
Solyc12g008760.1.1	Tomato	cytosol	76.03	69.7
EER98789	Sorghum	cytosol	73.55	69.53
GSMUA_Achr6P22570_001	Banana	cytosol	74.1	69.33
PGSC0003DMT400000915	Potato	cytosol	75.48	69.19
PGSC0003DMT400021726	Potato	cytosol	74.66	67.92
CDY24566	Canola	cytosol	37.74	32.08
CDX82265	Canola	cytosol	37.47	32.0
CDY25372	Canola	cytosol	37.47	31.85
CDY36064	Canola	cytosol	37.19	31.62
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	21.76	30.98
CDY66138	Canola	cytosol, peroxisome, plastid	31.68	29.95
CDY27881	Canola	mitochondrion	17.63	26.23
CDY42226	Canola	endoplasmic reticulum, extracellular	9.64	24.14
CDY00764	Canola	cytosol	36.36	22.96
CDY42140	Canola	cytosol	36.91	22.75
CDY08441	Canola	cytosol	37.19	22.61
CDY71180	Canola	cytosol	14.33	22.61
CDX73828	Canola	cytosol	36.64	22.28
CDX86257	Canola	cytosol, plastid	31.96	22.18
CDX85389	Canola	cytosol	31.96	22.18
CDY33934	Canola	cytosol	31.41	21.55
CDY05647	Canola	cytosol	31.41	21.55
CDY05299	Canola	cytosol	30.58	20.94
CDY24659	Canola	cytosol	30.58	20.86
CDY71161	Canola	cytosol	7.44	18.49
CDY49141	Canola	nucleus	9.37	12.1
CDY51773	Canola	nucleus	23.69	9.59

Protein Annotations

MapMan:12.3.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	GO:A0A078HDH9	UniProt:A0A078HDH9	InterPro:Arg_MeTrfase
EnsemblPlants:CDY35877	ProteinID:CDY35877	ProteinID:CDY35877.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464
GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740
GO:GO:0019538	GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00059415001	InterPro:IPR025799	PFAM:PF13649	PFscan:PS51678
PANTHER:PTHR11006	PANTHER:PTHR11006:SF53	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EECB93	:

Description

BnaA07g01100DBnaA07g01100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDH9]

Coordinates

chrLK032363:-:93388..95447

Molecular Weight (calculated)

40900.9 Da

IEP (calculated)

5.438

GRAVY (calculated)

-0.244

Length

363 amino acids

Sequence
(BLAST)

001: MAGTKNNHNE QGSDQNQNTK LPFEDADETM CDADVADDIT SADYYFDSYS HFGIHEEMLK DVVRTKSYRD VIYKNKFLVK DKIVLDVGAG TGILSLFCAK
101: AGAAHVYAVE CSQMADTAKE IVKSNGFSDV ITVLKGKIEE IELPVPKVDV IISEWMGYFL VYENMLDTVL YARNKWLVDG GIVLPDKASL YLTAIEDAHY
201: KEDKVEFWND VYGFDMSCIK RRAITEPLVD TVDGNQIVTD SKLLKTMDIS KMASEDASFT SPFKLVAKRN DHIHALVAYF DVSFTMCHKM IGFSTGPKSR
301: ATHWKQTVLY LDDVLTVCEG EMITGSMTIA PNKKNPRDVD IKLSYSLNGQ HCKISRTQLY KMR

Best Arabidopsis Sequence Match ( AT2G19670.1 )
(BLAST)

001: MTSTENNNNG SDETQTTKLH FEDADESMHD GDDNNADVAD DITSADYYFD SYSHFGIHEE MLKDVVRTKS YQDVIYKNKF LIKDKIVLDV GAGTGILSLF
101: CAKAGAAHVY AVECSQMADT AKEIVKSNGF SDVITVLKGK IEEIELPVPK VDVIISEWMG YFLLYENMLD TVLYARNKWL VDGGIVLPDK ASLYVTAIED
201: AHYKDDKVEF WDDVYGFDMS CIKRRAITEP LVDTVDGNQI VTDSKLLKTM DISKMAAGDA SFTAPFKLVA QRNDHIHALV AYFDVSFTMC HKKMGFSTGP
301: KSRATHWKQT VLYLEDVLTI CEGETITGSM TIAQNKKNPR DVDIKLSYSL NGQHCNISRT HFYKMR

Arabidopsis Description

PRMT12Probable protein arginine N-methyltransferase 1.2 [Source:UniProtKB/Swiss-Prot;Acc:O82210]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.