Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35877 | Canola | cytosol | 97.78 | 97.25 |
| AT2G19670.1 | Thale cress | cytosol | 91.97 | 90.71 |
| Zm00001d020188_P001 | Maize | extracellular | 66.76 | 78.76 |
| CDY06802 | Canola | cytosol | 83.93 | 77.89 |
| CDY14208 | Canola | cytosol | 70.91 | 77.81 |
| CDY43510 | Canola | cytosol | 83.93 | 77.69 |
| VIT_11s0016g02530.t01 | Wine grape | cytosol | 74.52 | 76.86 |
| CDY30213 | Canola | cytosol | 83.1 | 76.73 |
| CDY03574 | Canola | cytosol | 60.66 | 76.31 |
| CDY47762 | Canola | cytosol | 81.99 | 76.29 |
| KRH74166 | Soybean | nucleus | 77.56 | 74.47 |
| KRH49040 | Soybean | nucleus | 78.12 | 74.41 |
| TraesCS5B01G187400.1 | Wheat | cytosol | 75.62 | 71.84 |
| TraesCS5A01G196000.2 | Wheat | cytosol | 75.62 | 71.84 |
| TraesCS5D01G195000.1 | Wheat | cytosol | 75.35 | 71.58 |
| Solyc07g032240.2.1 | Tomato | cytosol | 74.24 | 71.47 |
| Os09t0359800-01 | Rice | cytosol | 76.45 | 71.32 |
| HORVU5Hr1G056790.7 | Barley | cytosol | 75.62 | 71.28 |
| GSMUA_Achr6P22570_001 | Banana | cytosol | 75.35 | 70.1 |
| EER98789 | Sorghum | cytosol | 74.24 | 69.79 |
| Solyc12g008760.1.1 | Tomato | cytosol | 76.45 | 69.7 |
| PGSC0003DMT400000915 | Potato | cytosol | 75.9 | 69.19 |
| PGSC0003DMT400021726 | Potato | cytosol | 75.07 | 67.92 |
| CDY24566 | Canola | cytosol | 37.95 | 32.08 |
| CDX82265 | Canola | cytosol | 37.67 | 32.0 |
| CDY25372 | Canola | cytosol | 37.67 | 31.85 |
| CDY36064 | Canola | cytosol | 37.4 | 31.62 |
| CDY33443 | Canola | cytosol, endoplasmic reticulum, peroxisome | 21.33 | 30.2 |
| CDY66138 | Canola | cytosol, peroxisome, plastid | 31.58 | 29.69 |
| CDY27881 | Canola | mitochondrion | 17.45 | 25.82 |
| CDY42226 | Canola | endoplasmic reticulum, extracellular | 9.7 | 24.14 |
| CDY00764 | Canola | cytosol | 36.84 | 23.13 |
| CDY08441 | Canola | cytosol | 37.67 | 22.78 |
| CDY42140 | Canola | cytosol | 37.12 | 22.75 |
| CDX73828 | Canola | cytosol | 37.12 | 22.45 |
| CDY71180 | Canola | cytosol | 14.13 | 22.17 |
| CDX86257 | Canola | cytosol, plastid | 31.86 | 21.99 |
| CDX85389 | Canola | cytosol | 31.86 | 21.99 |
| CDY33934 | Canola | cytosol | 31.3 | 21.36 |
| CDY05647 | Canola | cytosol | 31.3 | 21.36 |
| CDY05299 | Canola | cytosol | 30.47 | 20.75 |
| CDY24659 | Canola | cytosol | 30.47 | 20.68 |
| CDY71161 | Canola | cytosol | 7.48 | 18.49 |
| CDY49141 | Canola | nucleus | 9.42 | 12.1 |
| CDY51773 | Canola | nucleus | 22.99 | 9.25 |
Protein Annotations
| MapMan:12.3.4.1 | Gene3D:2.70.160.11 | Gene3D:3.40.50.150 | GO:A0A078CZZ6 | InterPro:Arg_MeTrfase | EnsemblPlants:CDX82711 |
| ProteinID:CDX82711 | ProteinID:CDX82711.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0006479 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00137979001 | InterPro:IPR025799 | PFAM:PF13649 | PFscan:PS51678 | PANTHER:PTHR11006 | PANTHER:PTHR11006:SF53 |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI0004EBA9C6 | : | : | : |
Description
BnaC07g01550D
Coordinates
chrLK031829:-:1529423..1531358
Molecular Weight (calculated)
40721.8 Da
IEP (calculated)
5.282
GRAVY (calculated)
-0.183
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATKNNHNE LGSDQHTKLP FEDVDETMCD ADVADDITSA DYYFDSYSHF GIHEEMLKDV VRTKSYRDVI YKNKFLVKDK IVLDVGAGTG ILSLFCAKAG
101: AAHVYAVECS QMADTAKEIV KSNGFSDVIT VLKGKIEEIE LPVPKVDVII SEWMGYFLVY ENMLDTVLYA RNKWLVDGGI VLPDKASLYL TAIEDAHYKE
201: DKVEFWNDVY GFDMSCIKRR AITEPLVDTV DGNQIVTDSK LLKTMDISKM ASEDASFTAP FKLVAKRNDH IHALVAYFDV SFTMCHKMIG FSTGPKSRAT
301: HWKQTVLYLE DVLTICEGEM ITGSMTIAPN KKNPRDVDIE LSYSLNGQHC KISRTQLYKM R
101: AAHVYAVECS QMADTAKEIV KSNGFSDVIT VLKGKIEEIE LPVPKVDVII SEWMGYFLVY ENMLDTVLYA RNKWLVDGGI VLPDKASLYL TAIEDAHYKE
201: DKVEFWNDVY GFDMSCIKRR AITEPLVDTV DGNQIVTDSK LLKTMDISKM ASEDASFTAP FKLVAKRNDH IHALVAYFDV SFTMCHKMIG FSTGPKSRAT
301: HWKQTVLYLE DVLTICEGEM ITGSMTIAPN KKNPRDVDIE LSYSLNGQHC KISRTQLYKM R
001: MTSTENNNNG SDETQTTKLH FEDADESMHD GDDNNADVAD DITSADYYFD SYSHFGIHEE MLKDVVRTKS YQDVIYKNKF LIKDKIVLDV GAGTGILSLF
101: CAKAGAAHVY AVECSQMADT AKEIVKSNGF SDVITVLKGK IEEIELPVPK VDVIISEWMG YFLLYENMLD TVLYARNKWL VDGGIVLPDK ASLYVTAIED
201: AHYKDDKVEF WDDVYGFDMS CIKRRAITEP LVDTVDGNQI VTDSKLLKTM DISKMAAGDA SFTAPFKLVA QRNDHIHALV AYFDVSFTMC HKKMGFSTGP
301: KSRATHWKQT VLYLEDVLTI CEGETITGSM TIAQNKKNPR DVDIKLSYSL NGQHCNISRT HFYKMR
101: CAKAGAAHVY AVECSQMADT AKEIVKSNGF SDVITVLKGK IEEIELPVPK VDVIISEWMG YFLLYENMLD TVLYARNKWL VDGGIVLPDK ASLYVTAIED
201: AHYKDDKVEF WDDVYGFDMS CIKRRAITEP LVDTVDGNQI VTDSKLLKTM DISKMAAGDA SFTAPFKLVA QRNDHIHALV AYFDVSFTMC HKKMGFSTGP
301: KSRATHWKQT VLYLEDVLTI CEGETITGSM TIAQNKKNPR DVDIKLSYSL NGQHCNISRT HFYKMR
Arabidopsis Description
PRMT12Probable protein arginine N-methyltransferase 1.2 [Source:UniProtKB/Swiss-Prot;Acc:O82210]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.