Factsheet for PGSC0003DMT400000915

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400000915
PGSC0003DMT400010997
PGSC0003DMT400021726
PGSC0003DMT400053912
PGSC0003DMT400077477

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19670.1	PGSC0003DMT400010997	AT4G25630.1	17666011
AT2G19670.1	PGSC0003DMT400053912	AT4G25630.1	17666011
AT2G19670.1	PGSC0003DMT400077477	AT4G25630.1	17666011
AT4G29510.1	PGSC0003DMT400010997	AT4G25630.1	17666011
AT4G29510.1	PGSC0003DMT400053912	AT4G25630.1	17666011
AT4G29510.1	PGSC0003DMT400077477	AT4G25630.1	17666011
AT4G29510.1	PGSC0003DMT400000915	AT4G29510.1	17666011
AT4G29510.1	PGSC0003DMT400021726	AT4G29510.1	17666011

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g008760.1.1	Tomato	cytosol	97.73	97.73
Zm00001d020188_P001	Maize	extracellular	65.15	84.31
PGSC0003DMT400021726	Potato	cytosol	84.6	83.96
VIT_11s0016g02530.t01	Wine grape	cytosol	73.99	83.71
KRH49040	Soybean	nucleus	75.0	78.36
KRH74166	Soybean	nucleus	73.99	77.93
CDX82711	Canola	cytosol	69.19	75.9
TraesCS5D01G195000.1	Wheat	cytosol	72.73	75.79
Bra039010.1-P	Field mustard	cytosol	69.44	75.76
TraesCS5B01G187400.1	Wheat	cytosol	72.47	75.53
TraesCS5A01G196000.2	Wheat	cytosol	72.47	75.53
CDY35877	Canola	cytosol	69.19	75.48
EER98789	Sorghum	cytosol	72.98	75.26
HORVU5Hr1G056790.7	Barley	cytosol	72.73	75.2
CDY06802	Canola	cytosol	73.23	74.55
GSMUA_Achr6P22570_001	Banana	cytosol	72.98	74.48
CDY43510	Canola	cytosol	72.98	74.1
Bra011118.1-P	Field mustard	cytosol	72.98	74.1
AT4G29510.1	Thale cress	cytosol	72.73	73.85
AT2G19670.1	Thale cress	cytosol	68.18	73.77
Bra024143.1-P	Field mustard	cytosol	72.22	73.52
Os09t0359800-01	Rice	cytosol	71.21	72.87
CDY47762	Canola	cytosol	71.21	72.68
Bra010325.1-P	Field mustard	cytosol	31.57	72.67
CDY14208	Canola	cytosol	60.35	72.64
CDY30213	Canola	cytosol	71.46	72.38
CDY03574	Canola	cytosol	51.77	71.43
PGSC0003DMT400059570	Potato	cytosol	28.79	30.73
PGSC0003DMT400021779	Potato	cytosol	27.78	26.76
PGSC0003DMT400008488	Potato	nucleus	34.6	21.99
PGSC0003DMT400012001	Potato	plastid	28.54	21.69

Protein Annotations

EntrezGene:102585842	MapMan:12.3.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	InterPro:IPR025799	UniProt:M0ZHK0
PFAM:PF06325	EnsemblPlantsGene:PGSC0003DMG400000343	PGSC:PGSC0003DMG400000343	EnsemblPlants:PGSC0003DMT400000915	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF53	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000296AE0A	RefSeq:XP_006353524.1	SEG:seg

Description

Protein arginine n-methyltransferase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400000343]

Coordinates

chr12:-:3757187..3761895

Molecular Weight (calculated)

44639.0 Da

IEP (calculated)

4.550

GRAVY (calculated)

-0.232

Length

396 amino acids

Sequence
(BLAST)

001: MDSVSNNEIE NSASYGKNPS KIKFQYEDDD EQVVQDETVT ESSNNLEVDE DISMCDPTTA AAVDDSTVGG DKTSADYYFD SYSHFGIHEE MLKDVVRTKT
101: YQNVIYKNSF LFKDKVVLDV GAGTGILSLF CAKVGAKHVY AIECSSMADM AQEIVKLNGF SDVITVIKGK VEEIDLPVPQ VDIIISEWMG YFLLYENMLD
201: TVLYARDKWL VKDGLVLPDK ASLCLTAIED ADYKEDKIEF WNSVYGFDMS CIRKQAMMEP IVDTVDQNQI VTNCQLLKTM DISKMTSGDA SFTAPFKLIA
301: ERDDYIHALV AYFDVSFTKC HKLLGFSTGP KSRSTHWKQT VLYLEDVITV CQGEAVVGSM TVAPNKKNPR DVDIMLKYSV NGKHCRVSRT QYYRMR

Best Arabidopsis Sequence Match ( AT4G29510.1 )
(BLAST)

001: MTKNSNHDEN EFISFEPNQN TKIRFEDADE DEVAEGSGVA GEETPQDESM FDAGESADTA EVTDDTTSAD YYFDSYSHFG IHEEMLKDVV RTKTYQNVIY
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR

Arabidopsis Description

PRMT11Protein arginine N-methyltransferase 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.