Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_11s0016g02530.t01 | |
| VIT_16s0050g00880.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G19670.1 | VIT_16s0050g00880.t01 | AT4G25630.1 | 17666011 |
| AT4G29510.1 | VIT_16s0050g00880.t01 | AT4G25630.1 | 17666011 |
| AT4G29510.1 | VIT_11s0016g02530.t01 | AT4G29510.1 | 17666011 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020188_P001 | Maize | extracellular | 74.57 | 85.29 |
| KRH74166 | Soybean | nucleus | 85.14 | 79.26 |
| KRH49040 | Soybean | nucleus | 85.14 | 78.63 |
| GSMUA_Achr6P22570_001 | Banana | cytosol | 86.86 | 78.35 |
| Solyc07g032240.2.1 | Tomato | cytosol | 82.0 | 76.53 |
| CDX82711 | Canola | cytosol | 76.86 | 74.52 |
| EER98789 | Sorghum | cytosol | 81.43 | 74.22 |
| TraesCS5D01G195000.1 | Wheat | cytosol | 80.57 | 74.21 |
| TraesCS5B01G187400.1 | Wheat | cytosol | 80.57 | 74.21 |
| TraesCS5A01G196000.2 | Wheat | cytosol | 80.57 | 74.21 |
| AT2G19670.1 | Thale cress | cytosol | 77.43 | 74.04 |
| Solyc12g008760.1.1 | Tomato | cytosol | 83.71 | 73.99 |
| PGSC0003DMT400000915 | Potato | cytosol | 83.71 | 73.99 |
| HORVU5Hr1G056790.7 | Barley | cytosol | 80.57 | 73.63 |
| CDY14208 | Canola | cytosol | 69.14 | 73.56 |
| Bra039010.1-P | Field mustard | cytosol | 76.29 | 73.55 |
| CDY35877 | Canola | cytosol | 76.0 | 73.28 |
| Os09t0359800-01 | Rice | cytosol | 80.86 | 73.13 |
| PGSC0003DMT400021726 | Potato | cytosol | 82.57 | 72.43 |
| CDY06802 | Canola | cytosol | 80.29 | 72.24 |
| CDY43510 | Canola | cytosol | 80.29 | 72.05 |
| Bra011118.1-P | Field mustard | cytosol | 80.29 | 72.05 |
| AT4G29510.1 | Thale cress | cytosol | 80.0 | 71.79 |
| Bra024143.1-P | Field mustard | cytosol | 79.14 | 71.21 |
| CDY03574 | Canola | cytosol | 58.29 | 71.08 |
| CDY47762 | Canola | cytosol | 78.57 | 70.88 |
| CDY30213 | Canola | cytosol | 78.57 | 70.33 |
| Bra010325.1-P | Field mustard | cytosol | 34.29 | 69.77 |
| VIT_10s0071g00750.t01 | Wine grape | cytosol | 36.86 | 31.16 |
| VIT_11s0016g04830.t01 | Wine grape | cytosol | 29.14 | 30.27 |
| VIT_05s0020g01540.t01 | Wine grape | cytosol, plastid | 32.29 | 21.52 |
| VIT_13s0084g00650.t01 | Wine grape | cytosol | 38.29 | 21.3 |
Protein Annotations
| EntrezGene:100266357 | wikigene:100266357 | MapMan:12.3.4.1 | Gene3D:2.70.160.11 | Gene3D:3.40.50.150 | InterPro:Arg_MeTrfase |
| ProteinID:CBI27942 | ProteinID:CBI27942.3 | UniProt:D7TBA7 | EMBL:FN595756 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0006464 | GO:GO:0006479 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0008469 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0019919 | GO:GO:0032259 | GO:GO:0034969 | GO:GO:0035242 | InterPro:IPR025799 | EntrezGene:LOC100266357 |
| wikigene:LOC100266357 | PFAM:PF06325 | PFscan:PS51678 | PANTHER:PTHR11006 | PANTHER:PTHR11006:SF53 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | UniParc:UPI00015C8B48 | ArrayExpress:VIT_11s0016g02530 | EnsemblPlantsGene:VIT_11s0016g02530 | EnsemblPlants:VIT_11s0016g02530.t01 | unigene:Vvi.22267 |
| RefSeq:XP_002282760 | RefSeq:XP_002282760.1 | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:2016645..2022355
Molecular Weight (calculated)
39696.7 Da
IEP (calculated)
5.276
GRAVY (calculated)
-0.127
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MCEPGESDKD IARSFELDDS VIGSDKTSAD YYFDSYSHFG IHEEMLKDVV RTKTYQNVIY KNKFLFKNKV VLDVGAGTGI LSLFCAKAGA KHVYAVECSH
101: MADMAKEIVE VNGFSDVITV MKGKVEEIVL PVAQVDIIIS EWMGYFLLFE NMLNTVLYAR DKWLVNDGIV LPDKASLYLT AIEDAEYKED KIEFWNSVYG
201: FDMSCIKKQA MMEPLVDTVD QNQIVTNCQL LKTMDISKMA PGDASFTAPF KLVASRDDYI HALVAYFDVS FTKCHKLTGF STGPRSRATH WKQTVLYLED
301: VLTICEGETV VGSMTVAQNK KNPRDVDIMI KYSFNGQRCQ VSRTQYYKMR
101: MADMAKEIVE VNGFSDVITV MKGKVEEIVL PVAQVDIIIS EWMGYFLLFE NMLNTVLYAR DKWLVNDGIV LPDKASLYLT AIEDAEYKED KIEFWNSVYG
201: FDMSCIKKQA MMEPLVDTVD QNQIVTNCQL LKTMDISKMA PGDASFTAPF KLVASRDDYI HALVAYFDVS FTKCHKLTGF STGPRSRATH WKQTVLYLED
301: VLTICEGETV VGSMTVAQNK KNPRDVDIMI KYSFNGQRCQ VSRTQYYKMR
001: MTKNSNHDEN EFISFEPNQN TKIRFEDADE DEVAEGSGVA GEETPQDESM FDAGESADTA EVTDDTTSAD YYFDSYSHFG IHEEMLKDVV RTKTYQNVIY
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR
Arabidopsis Description
PRMT11Protein arginine N-methyltransferase 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.