Factsheet for VIT_10s0071g00750.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17553	Soybean	cytosol	17.15	82.56
KRG89089	Soybean	nucleus	72.71	74.14
GSMUA_AchrUn_...	Banana	cytosol	41.3	70.66
Solyc04g008860.2.1	Tomato	nucleus	73.43	70.53
CDX82265	Canola	cytosol	71.74	69.88
CDY36064	Canola	cytosol	71.98	69.79
Bra001772.1-P	Field mustard	cytosol	71.74	68.43
Bra035822.1-P	Field mustard	cytosol	70.29	68.15
CDY25372	Canola	cytosol	70.29	68.15
CDY24566	Canola	cytosol	70.05	67.92
GSMUA_AchrUn_...	Banana	cytosol, vacuole	8.21	66.67
KRH40914	Soybean	cytosol, plastid	41.3	66.28
AT3G20020.3	Thale cress	cytosol	68.6	64.11
KRH11256	Soybean	endoplasmic reticulum	46.62	62.46
TraesCS1B01G185000.1	Wheat	peroxisome	43.72	61.99
Os10t0489100-01	Rice	cytosol, nucleus	58.45	61.27
TraesCS1D01G172200.1	Wheat	cytosol	58.45	60.96
TraesCS1A01G171700.1	Wheat	cytosol	58.45	60.96
OQU91600	Sorghum	cytosol	59.18	60.79
EES11648	Sorghum	mitochondrion	56.52	60.31
Zm00001d032633_P004	Maize	mitochondrion	58.21	59.8
TraesCS2B01G590000.1	Wheat	mitochondrion	54.83	59.74
Zm00001d026614_P001	Maize	mitochondrion	55.8	59.69
TraesCS2A01G554100.1	Wheat	mitochondrion	56.04	59.34
KRG90589	Soybean	cytosol, plastid	58.45	59.17
TraesCS2D01G560200.1	Wheat	mitochondrion	55.8	58.78
HORVU1Hr1G044440.3	Barley	plastid	58.7	57.45
Os04t0677066-00	Rice	nucleus	52.9	55.73
HORVU2Hr1G119480.1	Barley	cytosol	48.31	52.91
GSMUA_Achr5P10840_001	Banana	cytosol	53.62	50.8
GSMUA_Achr5P10850_001	Banana	cytosol, golgi, plastid	40.34	50.61
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	27.05	43.92
VIT_11s0016g04830.t01	Wine grape	cytosol	30.19	37.09
VIT_11s0016g02530.t01	Wine grape	cytosol	31.16	36.86
CDY42226	Canola	endoplasmic reticulum, extracellular	12.56	35.86
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	27.54	21.71
VIT_13s0084g00650.t01	Wine grape	cytosol	31.4	20.67

Protein Annotations

EntrezGene:100244030	wikigene:100244030	Gene3D:3.40.50.150	MapMan:35.1	InterPro:Arg_MeTrfase	ProteinID:CBI35368
ProteinID:CBI35368.3	UniProt:D7TXZ3	EMBL:FN596260	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008469
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0019919
GO:GO:0032259	GO:GO:0034969	GO:GO:0035242	InterPro:IPR025799	EntrezGene:LOC100244030	wikigene:LOC100244030
PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF70	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI00015CD4C6	ArrayExpress:VIT_10s0071g00750	EnsemblPlantsGene:VIT_10s0071g00750	EnsemblPlants:VIT_10s0071g00750.t01	RefSeq:XP_002267286	RefSeq:XP_002267286.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:17242514..17276256

Molecular Weight (calculated)

46099.6 Da

IEP (calculated)

6.296

GRAVY (calculated)

-0.346

Length

414 amino acids

Sequence
(BLAST)

001: MLPMNSGGYS NGYSHHPTTE KPHRQRRGGR RPRDGRDGGA GGGGWARASE PERRPCTDFD KAYFQSYSHV GIHEEMIKDR VRTETYKAAI TQHQNSIAGK
101: VVVDVGCGTG ILSIFCAQVG AKRVYAVDAS EIAIQASAVV KANNLSDTVI VLHGRVEDVE IDEGVDVIIS EWMGYMLLYE SMLESVITAR DRWLKPGGLI
201: LPSSATLYMA PVTHTDRYRD SIDFWRNVYG IDMSAMLALA KQCAFEEPSV ETISGENVLT WPHVVKQVDC YAVTIDELKS VATRYRFKSM MRAPLHGFAF
301: WFDVEFNGPA IFPTSTDSPS LFIGSSSNNP VDGSQRKKRS NPNEALVLST APEDPPTHWQ QTLIYLYEPV DLEQDQLIEG SVTLSQSKEN PRFMNIRLEY
401: AAGGRAFVKE SVMR

Best Arabidopsis Sequence Match ( AT3G20020.1 )
(BLAST)

001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSSAGRSFVK ESVMR

Arabidopsis Description

ATPRMT6PRMT6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.