Factsheet for TraesCS1B01G185000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, vacuole	12.67	72.55
TraesCS1D01G172200.1	Wheat	cytosol	96.58	71.03
TraesCS1A01G171700.1	Wheat	cytosol	95.89	70.53
KRH17553	Soybean	cytosol	19.52	66.28
Os10t0489100-01	Rice	cytosol, nucleus	86.99	64.3
OQU91600	Sorghum	cytosol	87.67	63.52
Zm00001d032633_P004	Maize	mitochondrion	85.27	61.79
HORVU1Hr1G044440.3	Barley	plastid	88.7	61.23
KRH40914	Soybean	cytosol, plastid	45.89	51.94
CDY24566	Canola	cytosol	66.1	45.2
TraesCS2B01G590000.1	Wheat	mitochondrion	58.22	44.74
CDY25372	Canola	cytosol	65.41	44.73
Bra035822.1-P	Field mustard	cytosol	65.07	44.5
KRG89089	Soybean	nucleus	61.64	44.34
CDY36064	Canola	cytosol	64.38	44.03
CDX82265	Canola	cytosol	64.04	44.0
VIT_10s0071g00750.t01	Wine grape	cytosol	61.99	43.72
Bra001772.1-P	Field mustard	cytosol	64.38	43.32
Solyc04g008860.2.1	Tomato	nucleus	63.01	42.69
AT3G20020.3	Thale cress	cytosol	64.73	42.66
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	35.96	41.18
KRG90589	Soybean	cytosol, plastid	57.53	41.08
KRH11256	Soybean	endoplasmic reticulum	41.1	38.84
GSMUA_Achr5P10840_001	Banana	cytosol	56.51	37.76
GSMUA_AchrUn_...	Banana	cytosol	31.16	37.6
GSMUA_Achr5P10850_001	Banana	cytosol, golgi, plastid	41.78	36.97
CDY42226	Canola	endoplasmic reticulum, extracellular	15.75	31.72
TraesCS5B01G187400.1	Wheat	cytosol	39.04	30.0
TraesCS2B01G172600.1	Wheat	cytosol	34.93	16.97
TraesCS2B01G133300.3	Wheat	cytosol	27.4	14.98

Protein Annotations

Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:35.1	InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	InterPro:IPR025799	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF70	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS1B01G185000	EnsemblPlants:TraesCS1B01G185000.1	TIGR:cd02440
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:332081364..332087937

Molecular Weight (calculated)

32505.5 Da

IEP (calculated)

6.502

GRAVY (calculated)

0.048

Length

292 amino acids

Sequence
(BLAST)

001: MLAGGEDGNG HLPRPRRPRR LGGMGSPSGQ AASALPHPAP PPCTDYDMAY FKAYSHIGVH EEMLKDHVRT NTYRNAIMHH KDLISGKVVL DVGCGTGVLS
101: IFCAFAGATR VYAVDASDIA LQAMEIVREN ELSDKVIVLH GRIEDVEIEE KVDVIISEWM GYMLLYESML GSVIFARDKW LKPGGLILPS HASLYLAPIT
201: NSHRYQDSIY FWRDVYGIKM SCMMPLAKQC TFMEPSVETI SGENVLTWPT VVAQVDCYTI QAPDLETITA AYKFTSMLRS IAWICILVRC RV

Best Arabidopsis Sequence Match ( AT2G19670.1 )
(BLAST)

001: MTSTENNNNG SDETQTTKLH FEDADESMHD GDDNNADVAD DITSADYYFD SYSHFGIHEE MLKDVVRTKS YQDVIYKNKF LIKDKIVLDV GAGTGILSLF
101: CAKAGAAHVY AVECSQMADT AKEIVKSNGF SDVITVLKGK IEEIELPVPK VDVIISEWMG YFLLYENMLD TVLYARNKWL VDGGIVLPDK ASLYVTAIED
201: AHYKDDKVEF WDDVYGFDMS CIKRRAITEP LVDTVDGNQI VTDSKLLKTM DISKMAAGDA SFTAPFKLVA QRNDHIHALV AYFDVSFTMC HKKMGFSTGP
301: KSRATHWKQT VLYLEDVLTI CEGETITGSM TIAQNKKNPR DVDIKLSYSL NGQHCNISRT HFYKMR

Arabidopsis Description

PRMT12Probable protein arginine N-methyltransferase 1.2 [Source:UniProtKB/Swiss-Prot;Acc:O82210]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.