Factsheet for TraesCS1D01G172200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G171700.1	Wheat	cytosol	98.99	98.99
TraesCS1B01G185000.1	Wheat	peroxisome	71.03	96.58
Os10t0489100-01	Rice	cytosol, nucleus	88.67	89.11
OQU91600	Sorghum	cytosol	90.18	88.83
HORVU1Hr1G044440.3	Barley	plastid	93.2	87.47
Zm00001d032633_P004	Maize	mitochondrion	88.16	86.85
GSMUA_AchrUn_...	Banana	cytosol, vacuole	9.32	72.55
KRH17553	Soybean	cytosol	14.86	68.6
GSMUA_AchrUn_...	Banana	cytosol	39.55	64.88
KRG89089	Soybean	nucleus	60.2	58.87
VIT_10s0071g00750.t01	Wine grape	cytosol	60.96	58.45
CDY24566	Canola	cytosol	61.46	57.14
CDY25372	Canola	cytosol	60.96	56.67
TraesCS2D01G560200.1	Wheat	mitochondrion	55.92	56.49
Bra035822.1-P	Field mustard	cytosol	60.71	56.44
CDY36064	Canola	cytosol	60.45	56.21
CDX82265	Canola	cytosol	59.95	56.0
KRH11256	Soybean	endoplasmic reticulum	43.07	55.34
Bra001772.1-P	Field mustard	cytosol	60.2	55.07
Solyc04g008860.2.1	Tomato	nucleus	59.7	54.99
AT3G20020.3	Thale cress	cytosol	60.45	54.18
KRH40914	Soybean	cytosol, plastid	35.01	53.88
KRG90589	Soybean	cytosol, plastid	55.42	53.79
GSMUA_Achr5P10850_001	Banana	cytosol, golgi, plastid	42.82	51.52
GSMUA_Achr5P10840_001	Banana	cytosol	54.66	49.66
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	26.45	41.18
TraesCS5D01G195000.1	Wheat	cytosol	34.01	35.53
CDY42226	Canola	endoplasmic reticulum, extracellular	11.84	32.41
TraesCS7D01G086300.1	Wheat	cytosol	29.97	31.48
TraesCS2D01G151900.1	Wheat	cytosol	31.99	21.03
TraesCS2D01G114900.1	Wheat	cytosol	26.95	19.35

Protein Annotations

Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:35.1	InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	InterPro:IPR025799	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF70	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS1D01G172200	EnsemblPlants:TraesCS1D01G172200.1	TIGR:cd02440
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:246067001..246076127

Molecular Weight (calculated)

44592.7 Da

IEP (calculated)

6.699

GRAVY (calculated)

-0.177

Length

397 amino acids

Sequence
(BLAST)

001: MLAGGEDGNG HLPRPRRPRR VGGMGSPSGQ AASALPHPAP PPCTDYDMAY FKAYSHIGVH EEMLKDHVRT NTYRNAIMHH KDLISGKVVL DVGCGTGVLS
101: IFCAFAGATR VYAVDASDIA LQAMEIVREN ELSDKVIVLH GRIEDVEIEE KVDVIISEWM GYMLLYESML GSVIFARDKW LKPGGLILPS HASLYLAPIT
201: NSHRYQDSIY FWRDVYGIKM SCMMPLAKQC TFMEPSVETI SGENVLTWPT VVAQVDCYTI QAPDLETITA AYKFTSMLQA PLHGFAFWFD VEFNGPVRQK
301: FKKQASQPLD VNMQNSNPSN KKKKADVSIV LSTAPEDAPT HWQQTLLYLF EPIELKKNQI MEGSVTISQS QQHARFLNIC LKYFTGDQWY VKESVMR

Best Arabidopsis Sequence Match ( AT3G20020.1 )
(BLAST)

001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSSAGRSFVK ESVMR

Arabidopsis Description

ATPRMT6PRMT6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.