Factsheet for Bra001772.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82265	Canola	cytosol	96.54	98.59
Bra035822.1-P	Field mustard	cytosol	91.01	92.51
AT3G20020.3	Thale cress	cytosol	86.87	85.1
KRH17553	Soybean	cytosol	16.13	81.4
VIT_10s0071g00750.t01	Wine grape	cytosol	68.43	71.74
KRG89089	Soybean	nucleus	66.82	71.43
GSMUA_AchrUn_...	Banana	cytosol, vacuole	8.29	70.59
Solyc04g008860.2.1	Tomato	nucleus	69.59	70.07
KRH40914	Soybean	cytosol, plastid	40.32	67.83
GSMUA_AchrUn_...	Banana	cytosol	37.33	66.94
TraesCS1B01G185000.1	Wheat	peroxisome	43.32	64.38
OQU91600	Sorghum	cytosol	56.68	61.04
Os10t0489100-01	Rice	cytosol, nucleus	55.07	60.51
TraesCS1A01G171700.1	Wheat	cytosol	55.3	60.45
TraesCS1D01G172200.1	Wheat	cytosol	55.07	60.2
Zm00001d032633_P004	Maize	mitochondrion	55.53	59.8
TraesCS2B01G590000.1	Wheat	mitochondrion	52.3	59.74
TraesCS2A01G554100.1	Wheat	mitochondrion	53.23	59.08
EES11648	Sorghum	mitochondrion	52.77	59.02
TraesCS2D01G560200.1	Wheat	mitochondrion	53.23	58.78
Zm00001d026614_P001	Maize	mitochondrion	51.84	58.14
KRH11256	Soybean	endoplasmic reticulum	41.01	57.61
KRG90589	Soybean	cytosol, plastid	53.46	56.72
HORVU1Hr1G044440.3	Barley	plastid	54.61	56.03
Os04t0677066-00	Rice	nucleus	50.69	55.98
HORVU2Hr1G119480.1	Barley	cytosol	46.54	53.44
GSMUA_Achr5P10840_001	Banana	cytosol	50.0	49.66
GSMUA_Achr5P10850_001	Banana	cytosol, golgi, plastid	37.1	48.79
Bra036027.1-P	Field mustard	cytosol	13.36	38.41
Bra010325.1-P	Field mustard	cytosol	15.21	38.37
Bra039010.1-P	Field mustard	cytosol	31.57	37.74
Bra024143.1-P	Field mustard	cytosol	33.64	37.53
Bra011118.1-P	Field mustard	cytosol	33.41	37.18
Bra022716.1-P	Field mustard	cytosol	30.65	35.47
Bra001445.1-P	Field mustard	cytosol	21.66	31.44
Bra034765.1-P	Field mustard	cytosol	32.03	23.44
Bra015140.1-P	Field mustard	mitochondrion	13.13	23.36
Bra029611.1-P	Field mustard	cytosol	27.19	22.22
Bra037440.1-P	Field mustard	cytosol, plastid	26.5	22.07
Bra020667.1-P	Field mustard	cytosol	26.5	21.62

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	InterPro:Arg_MeTrfase	EnsemblPlantsGene:Bra001772	EnsemblPlants:Bra001772.1	EnsemblPlants:Bra001772.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	InterPro:IPR025799
UniProt:M4CC42	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF70	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	UniParc:UPI0002540566	SEG:seg	:	:	:

Description

AT3G20020 (E=3e-200) ATPRMT6, PRMT6 | PRMT6 (PROTEIN ARGININE METHYLTRANSFERASE 6); methyltransferase

Coordinates

chrA03:-:18361210..18365063

Molecular Weight (calculated)

48114.9 Da

IEP (calculated)

5.432

GRAVY (calculated)

-0.346

Length

434 amino acids

Sequence
(BLAST)

001: MQSGGDYSNG FHGELDRVEE KQLPGLSSFG RAKRRSTRGG AHDPRGGLTN GFMVSDQLGE QNPLETQKSP PPCTDFDVAY FHSYAHVGIH EEMIKDRART
101: ETYKEAIMQH QSFIQGKVVV DVGCGTGILS IFCAQAGAKR VYAVDASDIA VQANEVVKAN GLSDKVIVLH GRVEDVEIDE EVDVIISEWM GYMLLYESML
201: GSVITARDRW LKPGGLILPS HATLYMAPVS HPDRYSHSID FWRNVYGIDM SAMMQLAKQC AFEEPSVESI SGENVLTWPE VVKHIDCQTV KIQELDSVIA
301: SYKFKSMMRA PMHGFGFWFD VEFSEPASSP AKTTSATSVA SGSSSMTMSP SREGNQKKRS NPSDALVLST SPEAPPTHWQ QTIVYLYDPV DVEQDQVIEG
401: SVTLSQSKEN RRFMNIHLEY SSAGRSFVKE SVMR

Best Arabidopsis Sequence Match ( AT3G20020.1 )
(BLAST)

001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSSAGRSFVK ESVMR

Arabidopsis Description

ATPRMT6PRMT6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.