Factsheet for TraesCS2D01G560200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G554100.1	Wheat	mitochondrion	98.98	99.49
TraesCS2B01G590000.1	Wheat	mitochondrion	94.91	98.16
EES11648	Sorghum	mitochondrion	81.93	82.99
Zm00001d026614_P001	Maize	mitochondrion	79.9	81.14
Os04t0677066-00	Rice	nucleus	80.15	80.15
HORVU2Hr1G119480.1	Barley	cytosol	76.84	79.89
KRH17553	Soybean	cytosol	14.76	67.44
KRG89089	Soybean	nucleus	58.78	56.9
TraesCS1D01G172200.1	Wheat	cytosol	56.49	55.92
VIT_10s0071g00750.t01	Wine grape	cytosol	58.78	55.8
CDY36064	Canola	cytosol	59.54	54.8
CDX82265	Canola	cytosol	58.78	54.35
CDY25372	Canola	cytosol	59.03	54.33
Bra035822.1-P	Field mustard	cytosol	59.03	54.33
CDY24566	Canola	cytosol	58.27	53.63
KRH40914	Soybean	cytosol, plastid	35.11	53.49
Bra001772.1-P	Field mustard	cytosol	58.78	53.23
Solyc04g008860.2.1	Tomato	nucleus	57.76	52.67
AT3G20020.3	Thale cress	cytosol	59.29	52.6
KRH11256	Soybean	endoplasmic reticulum	40.97	52.1
KRG90589	Soybean	cytosol, plastid	50.89	48.9
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	26.21	40.39
TraesCS5D01G195000.1	Wheat	cytosol	34.1	35.26
TraesCS7D01G086300.1	Wheat	cytosol	32.32	33.6
CDY42226	Canola	endoplasmic reticulum, extracellular	10.69	28.97
TraesCS2D01G151900.1	Wheat	cytosol	33.08	21.52
TraesCS2D01G114900.1	Wheat	cytosol	27.48	19.53

Protein Annotations

Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:35.1	InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	InterPro:IPR025799	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF70	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS2D01G560200	EnsemblPlants:TraesCS2D01G560200.1	TIGR:cd02440
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:633196214..633201119

Molecular Weight (calculated)

43242.7 Da

IEP (calculated)

5.139

GRAVY (calculated)

-0.046

Length

393 amino acids

Sequence
(BLAST)

001: MLPSHLNGHS PLARRRPQLP AASPPAAAAV GDPPAAAAGD AALEAHDRVY FQSYSHIGIH ESMIKDRVRT DAYREAIMLH QKFIEGKVVM DVGCGTGILS
101: VFCARAGAKR VYAVDASEIA TQASEIVKAN NLADKIVVIH GRVEDVDVEE KVDVIISEWM GYMLLYESML PSVLFARDKW LKPGGLILPS HATLFMAPIT
201: NSDRYEGSVD FWCDVYGINM SALVPLAKKF ASEEPSIEIV GGENVISWPF VVKHIDCYTF TVEEFKSITT TYKVSSMMLA PIHGFGLWFE VEFNGPAESC
301: SNLSSDSSPL DIIQKKRRRA SDSTVVLSTA PEDEPTHWHQ TILYFPDPIG VTQDQIIEGS VTITPSEENP RCLNIHLECS TGGQNLVKDF AMR

Best Arabidopsis Sequence Match ( AT3G20020.1 )
(BLAST)

001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSSAGRSFVK ESVMR

Arabidopsis Description

ATPRMT6PRMT6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.