CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, vacuole	9.29	74.51
KRH17553	Soybean	cytosol	15.16	72.09
KRH11256	Soybean	endoplasmic reticulum	52.81	69.9
KRG89089	Soybean	nucleus	61.37	61.82
GSMUA_AchrUn_...	Banana	cytosol	35.94	60.74
VIT_10s0071g00750.t01	Wine grape	cytosol	59.17	58.45
TraesCS1B01G185000.1	Wheat	peroxisome	41.08	57.53
Solyc04g008860.2.1	Tomato	nucleus	59.66	56.61
KRH40914	Soybean	cytosol, plastid	35.21	55.81
CDY36064	Canola	cytosol	58.19	55.74
TraesCS1A01G171700.1	Wheat	cytosol	54.03	55.67
OQU91600	Sorghum	cytosol	54.77	55.58
TraesCS1D01G172200.1	Wheat	cytosol	53.79	55.42
Zm00001d032633_P004	Maize	mitochondrion	54.52	55.34
Os10t0489100-01	Rice	cytosol, nucleus	53.3	55.19
CDY25372	Canola	cytosol	56.97	54.57
Bra035822.1-P	Field mustard	cytosol	56.97	54.57
CDX82265	Canola	cytosol	56.48	54.35
CDY24566	Canola	cytosol	56.72	54.33
Zm00001d026614_P001	Maize	mitochondrion	50.61	53.49
Bra001772.1-P	Field mustard	cytosol	56.72	53.46
TraesCS2B01G590000.1	Wheat	mitochondrion	49.14	52.89
EES11648	Sorghum	mitochondrion	49.88	52.58
AT3G20020.3	Thale cress	cytosol	55.99	51.69
HORVU1Hr1G044440.3	Barley	plastid	53.3	51.54
TraesCS2A01G554100.1	Wheat	mitochondrion	48.66	50.9
TraesCS2D01G560200.1	Wheat	mitochondrion	48.9	50.89
GSMUA_Achr5P10850_001	Banana	cytosol, golgi, plastid	40.34	50.0
Os04t0677066-00	Rice	nucleus	46.21	48.09
HORVU2Hr1G119480.1	Barley	cytosol	43.28	46.83
GSMUA_Achr5P10840_001	Banana	cytosol	48.66	45.54
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	24.45	39.22
KRH54868	Soybean	cytosol	31.78	34.76
KRH74166	Soybean	nucleus	31.78	34.57
KRH63019	Soybean	cytosol	31.3	34.22
KRH49040	Soybean	nucleus	31.54	34.04
CDY42226	Canola	endoplasmic reticulum, extracellular	10.76	30.34
KRH02253	Soybean	cytosol	28.85	22.06
KRH50844	Soybean	cytosol	28.85	22.01
KRH37109	Soybean	cytosol	28.61	21.79
KRH12054	Soybean	cytosol	28.61	21.51
KRH30091	Soybean	nucleus	31.54	20.71
KRH62812	Soybean	cytosol	31.3	20.32

Protein Annotations

EntrezGene:100795672	Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:35.1	UniProt:A0A0R0E9F6	EMBL:ACUP02012626
InterPro:Arg_MeTrfase	EnsemblPlantsGene:GLYMA_20G101000	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006479
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538
GO:GO:0032259	InterPro:IPR025799	EnsemblPlants:KRG90589	ProteinID:KRG90589	ProteinID:KRG90589.1	PFAM:PF13649
PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF70	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0003DE80EF
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:34428879..34437774

Molecular Weight (calculated)

46295.8 Da

IEP (calculated)

6.597

GRAVY (calculated)

-0.127

Length

409 amino acids

Sequence
(BLAST)

001: MQQPEKQINA PAGMPLPERR RRRRSSGICA TSGVRVQPQE EQQQVATRGT VLTDSDQFYF NWYAHIDVHE EMIKDRVRTD AYKNAIMRHK DFIRDKVVLD
101: VGCGTGILAI FCAQAGARRV YAVEASNIAL QTIRVVEANN LLNIITVLHG RVEDVEIGEK VDVIISEWMG YMLLCESMLG SVITARDRWL KPGGLVLPSK
201: ATLYMAPFTH AKRYRESIDF WRSVYGINMS AMVPLAKQCA FVGPSVETIT SENVLAWPQV VKCVNCSSVT IPELESITTR FKFNSLVKAP LHGFAFWFDV
301: EFTRLSPEPI SFQLSTSLVD DHPVGSQRQD LRDPTLLLST APEALPTHWQ QTLIYFYEPI ELEQDQLIEG KVTLSQSQEN HRNLNIELVY ARSIICQSVC
401: YVKVSDNIP

Best Arabidopsis Sequence Match ( AT2G19670.1 )
(BLAST)

001: MTSTENNNNG SDETQTTKLH FEDADESMHD GDDNNADVAD DITSADYYFD SYSHFGIHEE MLKDVVRTKS YQDVIYKNKF LIKDKIVLDV GAGTGILSLF
101: CAKAGAAHVY AVECSQMADT AKEIVKSNGF SDVITVLKGK IEEIELPVPK VDVIISEWMG YFLLYENMLD TVLYARNKWL VDGGIVLPDK ASLYVTAIED
201: AHYKDDKVEF WDDVYGFDMS CIKRRAITEP LVDTVDGNQI VTDSKLLKTM DISKMAAGDA SFTAPFKLVA QRNDHIHALV AYFDVSFTMC HKKMGFSTGP
301: KSRATHWKQT VLYLEDVLTI CEGETITGSM TIAQNKKNPR DVDIKLSYSL NGQHCNISRT HFYKMR

Arabidopsis Description

PRMT12Probable protein arginine N-methyltransferase 1.2 [Source:UniProtKB/Swiss-Prot;Acc:O82210]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.