CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50844	Soybean	cytosol	97.2	97.01
KRH37109	Soybean	cytosol	83.74	83.43
KRH12054	Soybean	cytosol	84.11	82.72
PGSC0003DMT400021779	Potato	cytosol	60.37	78.59
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	74.77	76.19
Bra037440.1-P	Field mustard	cytosol, plastid	71.4	73.32
CDX86257	Canola	cytosol, plastid	71.59	73.23
GSMUA_Achr11P...	Banana	cytosol	62.62	72.35
CDX85389	Canola	cytosol	70.65	72.28
PGSC0003DMT400012001	Potato	plastid	70.28	72.17
AT5G49020.1	Thale cress	cytosol	71.22	72.16
Solyc12g099560.1.1	Tomato	extracellular	70.09	71.84
CDY33934	Canola	cytosol	70.84	71.64
AT3G06930.2	Thale cress	cytosol	71.03	71.03
Bra029611.1-P	Field mustard	cytosol	70.28	70.81
CDY05299	Canola	cytosol	70.09	70.75
Bra020667.1-P	Field mustard	cytosol	70.28	70.68
CDY05647	Canola	cytosol	69.72	70.51
CDY24659	Canola	cytosol	70.09	70.49
Solyc05g054240.2.1	Tomato	cytosol	68.41	69.45
GSMUA_Achr11P...	Banana	cytosol	69.72	69.07
Os07t0671700-01	Rice	plasma membrane	66.54	67.42
EER97694	Sorghum	cytosol	66.73	66.11
TraesCS2B01G133300.3	Wheat	cytosol	65.42	65.54
TraesCS2A01G114100.1	Wheat	cytosol	65.42	65.3
Zm00001d007133_P002	Maize	cytosol	65.05	63.5
TraesCS2D01G114900.1	Wheat	cytosol	65.61	63.47
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	62.8	63.28
CDY27881	Canola	mitochondrion	21.68	47.54
Bra015140.1-P	Field mustard	mitochondrion	21.68	47.54
KRH17553	Soybean	cytosol	5.98	37.21
Zm00001d022469_P001	Maize	plasma membrane	67.29	33.77
KRH11256	Soybean	endoplasmic reticulum	19.07	33.01
KRH40914	Soybean	cytosol, plastid	15.33	31.78
KRH49040	Soybean	nucleus	21.87	30.87
KRH74166	Soybean	nucleus	21.31	30.32
KRG89089	Soybean	nucleus	22.43	29.56
KRH63019	Soybean	cytosol	20.56	29.41
KRH54868	Soybean	cytosol	20.19	28.88
KRG90589	Soybean	cytosol, plastid	22.06	28.85
CDY51773	Canola	nucleus	37.76	22.52
KRH30091	Soybean	nucleus	22.24	19.1
KRH62812	Soybean	cytosol	21.68	18.41

Protein Annotations

EntrezGene:100780736	MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	EMBL:ACUP02010299	InterPro:Arg_MeTrfase
EnsemblPlantsGene:GLYMA_17G026500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006479
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008469	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0019919	GO:GO:0032259	GO:GO:0034969
GO:GO:0035242	UniProt:I1MRI4	InterPro:IPR025799	EnsemblPlants:KRH02253	ProteinID:KRH02253	ProteinID:KRH02253.1
PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI000233E3AF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:1950350..1958649

Molecular Weight (calculated)

59918.5 Da

IEP (calculated)

6.200

GRAVY (calculated)

-0.207

Length

535 amino acids

Sequence
(BLAST)

001: MEESLGQKWK QREFALASVS DLSSAPSSAS PGIARFDSDG LQIHHQSHQI PFNVDPRTVQ LFKVSPVQSV CVVEGSDVGK KTLYSRGVTI QFRNDEESAA
101: FHCVVQQWKK EVNAQEGNVR NGTITTSKSK FDEKIESSSA KMYFHYYGQL LHQQNMLQDY VRTGTYHAAV LENRADFIGR VVVDVGAGSG ILSLFAAQAG
201: AKHVYAVEAS EMAEYARKLI AGNPTLAQRI TVIKGKVEDV ELPEKADILI SEPMGTLLVN ERMLESYVIA RDRFLVPTGK MFPGVGRIHM APFTDEYLFI
301: EIANKALFWQ QQNYYGVDLT PLHGTAFQGY FSQPVVDAFD PRLLIAPSMF HVIDFTKIKE EELYEIDIPL RFIASVGTRV HGLACWFDVL FNGSTVQRWL
401: TTAPGSPTTH WYQLRCVLSQ PIYVMAGQEI TGRLHLIAHN AQSYTIYLTL SAKMWGPGAE QGGILQTSSC KLDLKEPYYR MSQPQAYALA QDQQPQPLIQ
501: TQDIHIQSQD LDEPEIVQQP LPNSCAQIDS LMRNV

Best Arabidopsis Sequence Match ( AT3G06930.1 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQD IQTPNDELEE ELLQQLPQNP SAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.