Factsheet for TraesCS2B01G133300.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G114100.1	Wheat	cytosol	98.31	97.95
TraesCS2D01G114900.1	Wheat	cytosol	98.69	95.3
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	85.02	85.5
EER97694	Sorghum	cytosol	86.14	85.19
Os07t0671700-01	Rice	plasma membrane	82.21	83.14
Zm00001d007133_P002	Maize	cytosol	83.9	81.75
GSMUA_Achr11P...	Banana	cytosol	63.86	73.65
PGSC0003DMT400021779	Potato	cytosol	55.81	72.51
GSMUA_Achr11P...	Banana	cytosol	68.73	67.96
KRH02253	Soybean	cytosol	65.54	65.42
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	64.04	65.14
Solyc12g099560.1.1	Tomato	extracellular	63.48	64.94
PGSC0003DMT400012001	Potato	plastid	63.3	64.88
KRH50844	Soybean	cytosol	64.61	64.37
Bra029611.1-P	Field mustard	cytosol	63.86	64.22
KRH12054	Soybean	cytosol	65.36	64.15
CDY24659	Canola	cytosol	63.86	64.1
KRH37109	Soybean	cytosol	64.42	64.06
CDY05299	Canola	cytosol	63.3	63.77
CDX85389	Canola	cytosol	61.24	62.52
AT3G06930.2	Thale cress	cytosol	62.55	62.43
Solyc05g054240.2.1	Tomato	cytosol	61.61	62.43
CDX86257	Canola	cytosol, plastid	61.05	62.33
Bra037440.1-P	Field mustard	cytosol, plastid	60.67	62.19
CDY33934	Canola	cytosol	61.24	61.81
AT5G49020.1	Thale cress	cytosol	61.05	61.74
Bra020667.1-P	Field mustard	cytosol	61.42	61.65
CDY05647	Canola	cytosol	61.05	61.63
CDY27881	Canola	mitochondrion	19.66	43.03
Bra015140.1-P	Field mustard	mitochondrion	19.66	43.03
Zm00001d022469_P001	Maize	plasma membrane	84.64	42.4
TraesCS5B01G187400.1	Wheat	cytosol	20.6	28.95
TraesCS2B01G590000.1	Wheat	mitochondrion	20.04	28.16
TraesCS1B01G185000.1	Wheat	peroxisome	14.98	27.4
CDY51773	Canola	nucleus	35.77	21.29
TraesCS2B01G172600.1	Wheat	cytosol	20.97	18.64

Protein Annotations

MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	InterPro:IPR025799	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS2B01G133300	EnsemblPlants:TraesCS2B01G133300.3	TIGR:cd02440
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:99759738..99767538

Molecular Weight (calculated)

58953.1 Da

IEP (calculated)

5.118

GRAVY (calculated)

-0.146

Length

534 amino acids

Sequence
(BLAST)

001: MASADMFPNV SFSDVNAAAS QEAAGKAVFG LDPASGAPRL SLVRPGAEQA FQIDLSDAQI FKLGLMEWLC VSGETEAKAG VEEKLFSRAI KVVLRTEAES
101: KAFSLAFQRW KQQTISGKAG ESLENGSIVA CKSKFDTKIE ASSAQMYFHY YGQLLHQQNM LQDFVRTGTY YAAVMENRAD FEGKVVVDVG AGSGILSLFA
201: AQAGAKHVYA VEASEMVEHA QRLISGNPSF GQRITIIKGK VEEVELPEKA DILISEPMGT LLVNERMLES YVIARDRFLA PDGKMFPTTG RIHMAPFSDE
301: YLYVEMANKS LFWQQHNFFG VDLTPLHGSA FDGYFSQPVV DAFDPRLLIS QSTHHTLDFT SMKEEDLYEI DIPLSFVSSV GTRVHGLACW FDVLFNGSTV
401: QRWLTTAPGS PTTHWYQLRC VLAQPLYVMA GQEITGRLHL VAHSAQSYTI YLTMSAKMWG VGAEPDGILQ TSTAKLELKE PYYRLSQPQA YMPQDQQQLP
501: LSSLQAQGSG QQMQDGLSPG ITVEQERDSA AFTR

Best Arabidopsis Sequence Match ( AT3G06930.2 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQQ DIQTPNDELE EELLQQLPQN PSAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.