CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1
plastid 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12054	Soybean	cytosol	95.16	93.93
KRH02253	Soybean	cytosol	83.43	83.74
KRH50844	Soybean	cytosol	82.31	82.46
PGSC0003DMT400021779	Potato	cytosol	59.78	78.1
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	71.69	73.33
GSMUA_Achr11P...	Banana	cytosol	62.01	71.92
Bra037440.1-P	Field mustard	cytosol, plastid	69.09	71.21
CDX86257	Canola	cytosol, plastid	69.27	71.13
CDX85389	Canola	cytosol	68.72	70.55
AT5G49020.1	Thale cress	cytosol	69.27	70.45
PGSC0003DMT400012001	Potato	plastid	68.34	70.44
AT3G06930.2	Thale cress	cytosol	70.02	70.28
CDY33934	Canola	cytosol	69.09	70.13
Solyc12g099560.1.1	Tomato	extracellular	67.97	69.92
Solyc05g054240.2.1	Tomato	cytosol	68.53	69.83
CDY05647	Canola	cytosol	68.34	69.38
Bra020667.1-P	Field mustard	cytosol	68.53	69.17
Bra029611.1-P	Field mustard	cytosol	68.34	69.11
CDY05299	Canola	cytosol	67.97	68.87
CDY24659	Canola	cytosol	68.16	68.8
Os07t0671700-01	Rice	plasma membrane	66.85	67.99
GSMUA_Achr11P...	Banana	cytosol	67.23	66.85
EER97694	Sorghum	cytosol	66.48	66.11
TraesCS2B01G133300.3	Wheat	cytosol	64.06	64.42
TraesCS2A01G114100.1	Wheat	cytosol	64.06	64.18
Zm00001d007133_P002	Maize	cytosol	64.99	63.69
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	62.38	63.09
TraesCS2D01G114900.1	Wheat	cytosol	64.25	62.39
CDY27881	Canola	mitochondrion	21.23	46.72
Bra015140.1-P	Field mustard	mitochondrion	21.23	46.72
KRH17553	Soybean	cytosol	5.96	37.21
Zm00001d022469_P001	Maize	plasma membrane	67.04	33.77
KRH11256	Soybean	endoplasmic reticulum	19.18	33.33
KRH40914	Soybean	cytosol, plastid	15.08	31.4
KRH49040	Soybean	nucleus	21.79	30.87
KRH74166	Soybean	nucleus	21.42	30.59
KRG89089	Soybean	nucleus	22.16	29.31
KRH63019	Soybean	cytosol	20.11	28.88
KRG90589	Soybean	cytosol, plastid	21.79	28.61
KRH54868	Soybean	cytosol	19.74	28.34
CDY51773	Canola	nucleus	35.75	21.4
KRH30091	Soybean	nucleus	21.97	18.94
KRH62812	Soybean	cytosol	21.42	18.25

Protein Annotations

EntrezGene:100809620	MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	EMBL:ACUP02005414	InterPro:Arg_MeTrfase
EnsemblPlantsGene:GLYMA_09G044700	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006479
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008469	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0019919	GO:GO:0032259	GO:GO:0034969
GO:GO:0035242	InterPro:IPR025799	UniProt:K7LBT2	EnsemblPlants:KRH37109	ProteinID:KRH37109	ProteinID:KRH37109.1
PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI0002338FE5	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:3823893..3831711

Molecular Weight (calculated)

59988.5 Da

IEP (calculated)

5.923

GRAVY (calculated)

-0.222

Length

537 amino acids

Sequence
(BLAST)

001: MEDSAAQKRK QREFALASVS EVSSAPSSAS PGVSLFAGDR LQILNESRHV ALNAYLSAIQ LFRLGPIESV CMVEESEADK QTSYSSGVAI QFRNEEESEA
101: FHCVYQQWKK GFNVQGGNLP NGTNAITSKS KFDEKIESSS AKMYFHYYGQ LLHQQNMLQD YVRTGTYYAA VLENRADFVG RVVIDVGAGS GILSLFAAQA
201: GAKHVYAVEA SEMAEYARKL IAGNPILGQR ITVIKGKVED VELPEKADIL ISEPMGTLLV NERMLESYVI ARDRFLTPNG KMFPTVGRIH MAPFSDEYLF
301: VEIANKALFW RQQNYYGVDL TPLHGTAFQG YFSQPVVDAF DPRLLIAAPM FHVLDFTKIK EEELYEIDIP LKFTATVGAR LHGLACWFDV LFNGSTARRW
401: LTTAPGSPTT HWYQLRCVLS QPIYVMAGQE ITGRMHLIAH TAQSYTIYLK LSAKTWGPGA EQGGILQTSS CKLDLKEPYY RMSQPQAYPL AQDQQPQPLL
501: QTQDIHIQSQ ELDEVEMMQQ PSTKSCAQID SLMQNAS

Best Arabidopsis Sequence Match ( AT3G06930.1 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQD IQTPNDELEE ELLQQLPQNP SAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.