CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86257	Canola	cytosol, plastid	93.31	93.31
CDY05647	Canola	cytosol	91.01	89.98
CDY33934	Canola	cytosol	90.82	89.79
AT5G49020.1	Thale cress	cytosol	89.67	88.83
CDY05299	Canola	cytosol	81.45	80.38
CDY24659	Canola	cytosol	81.64	80.26
PGSC0003DMT400021779	Potato	cytosol	57.74	73.48
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	71.51	71.24
KRH02253	Soybean	cytosol	72.28	70.65
KRH50844	Soybean	cytosol	71.51	69.78
GSMUA_Achr11P...	Banana	cytosol	60.99	68.9
KRH37109	Soybean	cytosol	70.55	68.72
KRH12054	Soybean	cytosol	71.13	68.38
Solyc12g099560.1.1	Tomato	extracellular	67.88	68.01
PGSC0003DMT400012001	Potato	plastid	67.69	67.95
GSMUA_Achr11P...	Banana	cytosol	66.73	64.63
Solyc05g054240.2.1	Tomato	cytosol	64.82	64.33
Os07t0671700-01	Rice	plasma membrane	63.67	63.07
EER97694	Sorghum	cytosol	63.86	61.85
TraesCS2A01G114100.1	Wheat	cytosol	63.1	61.57
TraesCS2B01G133300.3	Wheat	cytosol	62.52	61.24
Zm00001d007133_P002	Maize	cytosol	62.72	59.85
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	60.61	59.7
TraesCS2D01G114900.1	Wheat	cytosol	62.91	59.49
CDY27881	Canola	mitochondrion	24.86	53.28
CDY35877	Canola	cytosol	22.18	31.96
CDX82711	Canola	cytosol	21.99	31.86
Zm00001d022469_P001	Maize	plasma membrane	63.86	31.33
CDY14208	Canola	cytosol	19.5	31.0
CDY47762	Canola	cytosol	22.56	30.41
CDY43510	Canola	cytosol	22.56	30.26
CDY30213	Canola	cytosol	22.56	30.18
CDY06802	Canola	cytosol	22.37	30.08
CDY03574	Canola	cytosol	15.87	28.92
CDY66138	Canola	cytosol, peroxisome, plastid	20.84	28.39
CDY24566	Canola	cytosol	21.99	26.93
CDX82265	Canola	cytosol	21.61	26.59
CDY36064	Canola	cytosol	21.61	26.46
CDY25372	Canola	cytosol	21.61	26.46
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	11.85	24.31
CDY51773	Canola	nucleus	39.2	22.85
CDY71180	Canola	cytosol	9.56	21.74
CDY00764	Canola	cytosol	23.14	21.04
CDY08441	Canola	cytosol	23.71	20.77
CDY42140	Canola	cytosol	23.14	20.54
CDX73828	Canola	cytosol	22.94	20.1
CDY42226	Canola	endoplasmic reticulum, extracellular	4.97	17.93
CDY71161	Canola	cytosol	4.59	16.44
CDY49141	Canola	nucleus	7.65	14.23

Protein Annotations

MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	GO:A0A078DAT4	InterPro:Arg_MeTrfase	EnsemblPlants:CDX85389
ProteinID:CDX85389	ProteinID:CDX85389.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006479
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00143068001	InterPro:IPR025799	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF10
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EE7ED8	SEG:seg	:	:

Description

BnaC07g27000D

Coordinates

chrLK031841:+:1507081..1510814

Molecular Weight (calculated)

58464.6 Da

IEP (calculated)

5.039

GRAVY (calculated)

-0.181

Length

523 amino acids

Sequence
(BLAST)

001: MEAPCMNKLK QKEFTLASLT DLTSSSSSPV VATFSCVDEV TELRFQESES ADGFSFDLSS GQLFKLGPLQ LVCVCDSSNS TKENSFSRGV VIKFRDEKES
101: KDFCDSFEEW TKDAVTKGSC LPNGTVSYSS SKFDNKIEAA SAKMYFRYYG QLLHQQNMLQ DYVRTGTYHA AVMENRSDFS GRVVVDVGAG SGILSMFAAL
201: AGAKHVYAVE ASEMADYARK LIAGNPLLAE RITVIKGKIE DVELPEKADV LISEPMGTLL VNERMLETYV IARDRFLSPN GKMFPTVGRI HMAPFADEFL
301: FIEMANKALF WQHQNYYGVD LTPLYGSAHQ GYFSQPVVDA FDPRLLVAPS MFHVIDFTKM KEEQFYEIDV PLKFTASVCT RVHGLACWFD VLFDGSTVQR
401: WFTTAPGAPT THWYQIRCVL LQPIHVMAGQ EITGRLHLVA HSAQSYTINL NLSAKMWGPG ANQGGILQTS SCKLDLKEPY YRMSQPQVYP VAQEPPAQPQ
501: DLQIQSDDLE EVELLQQNTN AQF

Best Arabidopsis Sequence Match ( AT5G49020.1 )
(BLAST)

001: MEIPSLNKQQ EFTLASVTDL TSPSSSLSSS PVVATFSCVN EVKELRFQES KSSDGFSFDL SSTQLFKLGP LQFTCVSDGS ISSAKEKSSF SRGVVIKFRD
101: EKDSKEFCDS FEECKKDDAV KQGSALPNGT VVSANKSKFD DKIEAASAKM YFHYYGQLLH QQNMLQDYVR TGTYHAAVME NRSDFSGRVV VDVGAGSGIL
201: SMFAALAGAK HVYAVEASEM AEYARKLIAG NPLLAERITV IKGKIEDIEL PEKADVLISE PMGTLLVNER MLETYVIARD RFLSPNGKMF PTVGRIHMAP
301: FADEFLFVEM ANKALFWQQQ NYYGVDLTPL YVSAHQGYFS QPVVDAFDPR LLVAPSMFHV IDFTMMTEEQ FYEIDIPLKF TASVCTRIHG LACWFDVLFD
401: GSTVQRWFTT APGAPTTHWY QIRCVLSQPI HVMAGQEITG RLHLIAHSAQ SYTINLTLSA KMWGPGANQG GILQTSSCKL DLKEPYYRMS QPQVYPTQEP
501: PAQSQDIHIH SDDLEELELL QQNANAQL

Arabidopsis Description

PRMT14Probable histone-arginine methyltransferase 1.4 [Source:UniProtKB/Swiss-Prot;Acc:A3KPF2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.