CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08441	Canola	cytosol	93.89	92.63
CDY49141	Canola	nucleus	41.43	86.83
CDY00764	Canola	cytosol	80.31	82.26
CDX73828	Canola	cytosol	82.0	80.9
AT3G12270.1	Thale cress	cytosol	82.51	80.87
Os07t0640000-01	Rice	cytosol	39.9	58.31
Zm00001d014027_P001	Maize	cytosol	17.32	54.84
KRH30091	Soybean	nucleus	56.37	53.29
KRH62812	Soybean	cytosol	55.69	52.06
VIT_13s0084g00650.t01	Wine grape	cytosol	55.18	51.67
TraesCS2D01G151900.1	Wheat	cytosol	51.1	49.83
PGSC0003DMT400008488	Potato	nucleus	52.46	49.6
TraesCS2A01G147100.1	Wheat	cytosol	50.59	49.58
TraesCS2B01G172600.1	Wheat	cytosol	50.42	49.42
Solyc01g096550.2.1	Tomato	cytosol	52.12	49.12
EER96428	Sorghum	cytosol	50.59	48.46
Zm00001d019697_P001	Maize	cytosol	49.75	48.03
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.97	47.63
HORVU2Hr1G026200.11	Barley	cytosol	48.9	46.75
CDX82711	Canola	cytosol	22.75	37.12
CDY35877	Canola	cytosol	22.75	36.91
CDY14208	Canola	cytosol	19.69	35.26
CDY47762	Canola	cytosol	23.09	35.05
CDY06802	Canola	cytosol	22.92	34.7
CDY43510	Canola	cytosol	22.92	34.62
CDY03574	Canola	cytosol	16.81	34.49
CDY30213	Canola	cytosol	22.75	34.27
CDY24566	Canola	cytosol	24.45	33.72
CDY25372	Canola	cytosol	23.94	33.02
CDY36064	Canola	cytosol	23.77	32.79
CDX82265	Canola	cytosol	23.09	32.0
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	12.9	29.8
CDY66138	Canola	cytosol, peroxisome, plastid	18.51	28.39
CDY27881	Canola	mitochondrion	10.87	26.23
CDY42226	Canola	endoplasmic reticulum, extracellular	6.28	25.52
CDX85389	Canola	cytosol	20.54	23.14
CDY33934	Canola	cytosol	20.37	22.68
CDX86257	Canola	cytosol, plastid	20.03	22.56
CDY05647	Canola	cytosol	20.2	22.5
CDY24659	Canola	cytosol	20.03	22.18
CDY05299	Canola	cytosol	19.86	22.08
CDY71180	Canola	cytosol	8.49	21.74
CDY71161	Canola	cytosol	4.58	18.49
CDY51773	Canola	nucleus	19.86	13.04
Os07t0640100-01	Rice	mitochondrion	0.51	2.29

Protein Annotations

MapMan:17.1.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	GO:A0A078HUG9	UniProt:A0A078HUG9	InterPro:Arg_MeTrfase
EnsemblPlants:CDY42140	ProteinID:CDY42140	ProteinID:CDY42140.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0005488	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00074321001	InterPro:IPR013087
InterPro:IPR025799	PFAM:PF13649	ScanProsite:PS00028	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF89
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	SUPFAM:SSF57667	UniParc:UPI0004EF0EAB	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
SEG:seg	:	:	:	:	:

Description

BnaC05g40790DBnaC05g40790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUG9]

Coordinates

chrLK032516:+:72538..75197

Molecular Weight (calculated)

65799.2 Da

IEP (calculated)

4.344

GRAVY (calculated)

-0.333

Length

589 amino acids

Sequence
(BLAST)

001: MAAETKMVKD VVPNYSDNEE EENFSDDGDW GDWEAADKDD DDVLESDFVC LFCESRFASC DSLFEHCRLS HGFDFHGARK ALKLDFYASF KLINYIRSQV
101: AANKCWSWGA LQKCQLEAKD VNFPWDEEKY LKPFWQEDSL LYSFVDDEEE EDEEEALDRE DLIEDLQKLG DLSIVDDEAI GESSMTNNGK CKDVNRISNC
201: DDVKQIVNGK DKEPRVCDGR LVGRNIRKVN ENYFGSYSSF GIHREMISDK VRTEAYRDAL LKNPSLLSGS VVMDVGCGTG ILSLFAAKAG ASRVVAVEAS
301: EKMAKVATKI AKDNKVFNDK EHSGVLEVAN SMVEELEKSI KIQPHSVDVL VSEWMGYCLL YESMLTSVLY ARDRWLKPGG AILPDTATML VAGFGKGATS
401: LPFWEDVYGF DMSSIGKEIL EDTARIPIVD VIEERDLVTQ PALLQSFDLA TMIPDEVDFT ATATLEPTEA ETEARLCHGV VLWFDTGFTD RFCKENPTVL
501: STSPYTPPTH WAQTVLTFQE PISLAPATVL SGDDRRGAVG TKECPASSIQ LRVSVARASE HRSIDVSLET TGVSSKGQKR RWPVQIFNL

Best Arabidopsis Sequence Match ( AT3G12270.1 )
(BLAST)

001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L

Arabidopsis Description

PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.