CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034765.1-P	Field mustard	cytosol	98.16	98.82
CDY42140	Canola	cytosol	92.63	93.89
CDY49141	Canola	nucleus	42.88	91.1
CDY00764	Canola	cytosol	80.74	83.83
CDX73828	Canola	cytosol	81.91	81.91
AT3G12270.1	Thale cress	cytosol	81.91	81.36
Os07t0640000-01	Rice	cytosol	39.53	58.56
Zm00001d014027_P001	Maize	cytosol	16.92	54.3
KRH30091	Soybean	nucleus	56.45	54.09
KRH62812	Soybean	cytosol	56.11	53.17
VIT_13s0084g00650.t01	Wine grape	cytosol	55.11	52.31
Solyc01g096550.2.1	Tomato	cytosol	52.76	50.4
PGSC0003DMT400008488	Potato	nucleus	52.09	49.92
TraesCS2A01G147100.1	Wheat	cytosol	49.92	49.58
TraesCS2D01G151900.1	Wheat	cytosol	50.08	49.5
TraesCS2B01G172600.1	Wheat	cytosol	49.58	49.25
EER96428	Sorghum	cytosol	49.25	47.8
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.43	47.79
Zm00001d019697_P001	Maize	cytosol	48.74	47.7
HORVU2Hr1G026200.11	Barley	cytosol	48.07	46.59
CDX82711	Canola	cytosol	22.78	37.67
CDY35877	Canola	cytosol	22.61	37.19
CDY14208	Canola	cytosol	19.6	35.56
CDY47762	Canola	cytosol	22.95	35.31
CDY06802	Canola	cytosol	22.95	35.22
CDY43510	Canola	cytosol	22.95	35.13
CDY30213	Canola	cytosol	22.78	34.78
CDY03574	Canola	cytosol	16.58	34.49
CDY24566	Canola	cytosol	24.46	34.19
CDY25372	Canola	cytosol	23.95	33.49
CDY36064	Canola	cytosol	23.79	33.26
CDX82265	Canola	cytosol	23.12	32.47
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	13.23	30.98
CDY66138	Canola	cytosol, peroxisome, plastid	18.43	28.65
CDY27881	Canola	mitochondrion	10.89	26.64
CDY42226	Canola	endoplasmic reticulum, extracellular	6.37	26.21
CDX85389	Canola	cytosol	20.77	23.71
CDY33934	Canola	cytosol	20.77	23.44
CDY24659	Canola	cytosol	20.77	23.31
CDY05299	Canola	cytosol	20.6	23.21
CDX86257	Canola	cytosol, plastid	20.27	23.14
CDY05647	Canola	cytosol	20.44	23.06
CDY71180	Canola	cytosol	8.54	22.17
CDY71161	Canola	cytosol	4.69	19.18
CDY51773	Canola	nucleus	20.77	13.82
Os07t0640100-01	Rice	mitochondrion	0.5	2.29

Protein Annotations

MapMan:17.1.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	GO:A0A078F4U5	UniProt:A0A078F4U5	InterPro:Arg_MeTrfase
EnsemblPlants:CDY08441	ProteinID:CDY08441	ProteinID:CDY08441.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0005488	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00000202001	InterPro:IPR013087
InterPro:IPR025799	PFAM:PF13649	ScanProsite:PS00028	PFscan:PS50157	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF89	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	SUPFAM:SSF57667	UniParc:UPI0004EE2FDB	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

BnaA05g26770DBnaA05g26770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4U5]

Coordinates

chrLK031986:-:191058..193729

Molecular Weight (calculated)

66134.2 Da

IEP (calculated)

4.267

GRAVY (calculated)

-0.341

Length

597 amino acids

Sequence
(BLAST)

001: MAAETKMVKD GDPNYSDDND EEENFSEDGD WGDWEAAEKD DDDGFESDFV CLFCDSRFVS SDSLFDHCRL SHGFDFHGAR KALKLDFYAS FKLINYIRSQ
101: VAENKCWSWG ALGKCQLEAK DVNFPWDEEK YLKPFLQEDS LLYSFADDEE EEDEEEALDR EDLIEDLRKL GDLSIVDDEA IGESSVSNNG KCKDVSLISN
201: SDDGKQSCAD GLVVVNGKGK EPSVCDGRLV GRNIRKVNEN YFGSYSSFGI HREMISDKVR TEAYRDALLK NPSLMSGSVV MDVGCGTGIL SLFAAKAGAS
301: RVVAVEASEK MAKVATKIAK DNKVFNDKEH NGVLEVANSM VEELEKSIKI QPHSVDVLVS EWMGYCLLYE SMLTSVLYAR DRWLKPGGAI LPDTATMFVA
401: GFGKGATSLP FWEDVYGFDM SSIGKEILED TARIPIVDVV EERDLVTQPA LLQSFDLATM KPDEVDFTAT ATLEPTESET EARLCHGVVL WFDTGFTDRF
501: CKETPTVLST SPYTPPTHWA QTVLTFQEPI SVAPATVLSG DDRQGAIGTK ECPASSIQLR VSVARASEHR SIDVSLETTG VSSKGQKLRW PVQIFNL

Best Arabidopsis Sequence Match ( AT3G12270.1 )
(BLAST)

001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L

Arabidopsis Description

PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.