Factsheet for Solyc01g096550.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008488	Potato	nucleus	95.36	95.67
Os07t0640000-01	Rice	cytosol	38.08	59.06
VIT_13s0084g00650.t01	Wine grape	cytosol	57.44	57.07
Bra001445.1-P	Field mustard	cytosol	27.04	56.52
KRH30091	Soybean	nucleus	54.56	54.74
KRH62812	Soybean	cytosol	54.56	54.13
Bra034765.1-P	Field mustard	cytosol	50.72	53.46
CDY08441	Canola	cytosol	50.4	52.76
AT3G12270.1	Thale cress	cytosol	50.72	52.75
CDY00764	Canola	cytosol	48.0	52.17
CDY42140	Canola	cytosol	49.12	52.12
Zm00001d014027_P001	Maize	cytosol	15.36	51.61
CDX73828	Canola	cytosol	49.28	51.59
TraesCS2B01G172600.1	Wheat	cytosol	49.44	51.41
TraesCS2A01G147100.1	Wheat	cytosol	49.44	51.41
TraesCS2D01G151900.1	Wheat	cytosol	49.6	51.32
EER96428	Sorghum	cytosol	50.08	50.89
Zm00001d019697_P001	Maize	cytosol	49.6	50.82
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.0	49.62
HORVU2Hr1G026200.11	Barley	cytosol	47.68	48.38
CDY49141	Canola	nucleus	18.4	40.93
Solyc12g008760.1.1	Tomato	cytosol	21.92	34.6
Solyc07g032240.2.1	Tomato	cytosol	20.64	34.4
Solyc04g008860.2.1	Tomato	nucleus	21.28	30.86
Solyc08g067050.2.1	Tomato	cytosol	17.28	29.11
Solyc05g054240.2.1	Tomato	cytosol	18.4	21.82
Solyc12g099560.1.1	Tomato	extracellular	17.92	21.46
Os07t0640100-01	Rice	mitochondrion	0.16	0.76

Protein Annotations

MapMan:17.1.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0006355	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008469	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538
GO:GO:0019919	GO:GO:0032259	GO:GO:0034969	GO:GO:0035242	InterPro:IPR025799	UniProt:K4B043
PFAM:PF12756	PFAM:PF13649	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF89	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	SUPFAM:SSF57667	EnsemblPlantsGene:Solyc01g096550.2	EnsemblPlants:Solyc01g096550.2.1	UniParc:UPI0002767A6F	InterPro:Znf_C2H2_sf
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:87631036..87636341

Molecular Weight (calculated)

69086.2 Da

IEP (calculated)

4.306

GRAVY (calculated)

-0.287

Length

625 amino acids

Sequence
(BLAST)

001: MAMEELNTVY MEVEDDNSDD DKDQNWDDWE NGDEEDEEEA MSSKLLCLFC DSTYDSSNAL FEHCASEHRF HFNTLKNSLA LDFYGCFKLI NYVRSKVAGN
101: KCWSCGIVCR SKEDLLNHLH EVASFDNGKL PWNDDEFLKP FLNEDALLYS FDEDDEGEDD MDNMPIDKEE LIKDLEQISI DEDDFTLETE ENKPTAFSLS
201: GGKSTSLTNT TLSNGVVSAE GGVSSYKNNH DLDSSLYIAK VAANKIKDVN KNYFGGYSSY GIHRDMISDK VRTDAYRQAI LENPSLLKGA VVMDVGCGTG
301: ILSLFAAQAG ASRVIAVEAS EKMAAVAAKI AKDNNLLRIG SKNEGSDQGN GVMEVVQGMV EELKSAQKVQ PHSVDVLVSE WMGYCLLYES MLSSVLYARD
401: QFLKPGGAVL PDMATMFAAG FGRGGTSIPF WENVYGFNMS CIGEEIVKDA SRIPIVDVVD SRDIITNSKV LQNFDLVTMK LEEMDFTGMV ELELKGETSA
501: NGSTGSKPVT NWCYGVVVWF ETGFTERFCK EKPTNLSTSP HTTSTHWSQT ILTFSEPIAM VSPGTLNVDK MAAVGSDACP AVKIQCRISV VRAAQHRSID
601: ISMELSGIGP FGRKRNWPAQ MFNVL

Best Arabidopsis Sequence Match ( AT3G12270.1 )
(BLAST)

001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L

Arabidopsis Description

PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.