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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 3
  • plasma membrane 1
  • mitochondrion 1
  • cytoskeleton 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400059570 Potato cytosol 98.65 98.65
VIT_11s0016g04830.t01 Wine grape cytosol 70.08 77.15
KRH63019 Soybean cytosol 72.78 72.19
KRH54868 Soybean cytosol 72.78 72.19
GSMUA_Achr10P... Banana cytosol 68.73 67.28
Bra022716.1-P Field mustard cytosol 66.04 65.33
AT1G04870.2 Thale cress cytosol 67.39 65.27
Zm00001d036131_P001 Maize cytosol 66.31 65.25
EER87820 Sorghum cytosol 66.04 64.64
CDY66138 Canola cytosol, peroxisome, plastid 66.85 64.58
TraesCS4A01G390400.1 Wheat cytosol 65.23 64.02
TraesCS7D01G086300.1 Wheat cytosol 64.96 63.76
Os06t0142800-01 Rice cytosol 65.23 63.68
Bra036027.1-P Field mustard cytosol 25.88 63.58
TraesCS7A01G090500.1 Wheat cytosol 64.96 63.25
HORVU7Hr1G020620.2 Barley cytosol 64.96 62.92
CDY71180 Canola cytosol 35.04 56.52
CDY71161 Canola cytosol 22.1 56.16
Solyc04g008860.2.1 Tomato nucleus 35.58 30.63
Solyc07g032240.2.1 Tomato cytosol 30.73 30.4
Solyc12g008760.1.1 Tomato cytosol 30.73 28.79
Solyc05g054240.2.1 Tomato cytosol 28.84 20.3
Solyc12g099560.1.1 Tomato extracellular 28.03 19.92
Solyc01g096550.2.1 Tomato cytosol 29.11 17.28
Protein Annotations
Gene3D:2.70.160.11Gene3D:3.40.50.150MapMan:35.1InterPro:Arg_MeTrfaseGO:GO:0000003GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0006139GO:GO:0006355GO:GO:0006464GO:GO:0006479GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008469GO:GO:0009058GO:GO:0009791GO:GO:0009987
GO:GO:0010228GO:GO:0016043GO:GO:0016277GO:GO:0016740GO:GO:0019538GO:GO:0019919
GO:GO:0032259GO:GO:0034969GO:GO:0035241GO:GO:0035242InterPro:IPR025799UniProt:K4CLT1
PFAM:PF06325PFscan:PS51678PANTHER:PTHR11006PANTHER:PTHR11006:SF68InterPro:SAM-dependent_MTasesSUPFAM:SSF53335
EnsemblPlantsGene:Solyc08g067050.2EnsemblPlants:Solyc08g067050.2.1UniParc:UPI000276C097:::
Description
Protein arginine N-methyltransferase PRMT10 [Source:Projected from Arabidopsis thaliana (AT1G04870) UniProtKB/Swiss-Prot;Acc:Q9MAT5]
Coordinates
chr8:-:55962967..55968795
Molecular Weight (calculated)
42259.0 Da
IEP (calculated)
6.137
GRAVY (calculated)
-0.374
Length
371 amino acids
Sequence
(BLAST)
001: MGSSSNAAAP INNVDKGVDY ANYFCTYAFL YHQKEMLSDR VRMDAYYNAI FQNKHHFAGK AVLDVGTGSG ILALWSAQAG ARKVYAVEAT KMAEHARELV
101: KTNGFEHVVE VIEGSMEDIT LPEKVDVIIS EWMGYFLLRE SMFDSVICAR DRWLNPDGVM YPSHARMWVA PIRSGLVDQK KIDYDRAMDD WSHFVNETKT
201: FYGVDMGSLT KPFTDEQRKY YLQTSLWNNL HPNQVIGKPA VIKEIDCLTS SVNDLLSLQA NISSIITAEN TRFCGFGGWF DVHFRGRKEN PAKNEIELTT
301: APSEDLGTHW GQQVFLFYPS TRVSQGDNMT MNFSMNRSKE NHRLLEVEFD CELRQSSGKS LPSFSKKFYI E
Best Arabidopsis Sequence Match ( AT1G04870.2 )
(BLAST)
001: MRSSQNGGAM GGRAAGTGGG GPSAPVDKEV DYAQYFCTYS FLYHQKDMLS DRVRMDAYFN AVFQNKHHFE GKTVLDVGTG SGILAIWSAQ AGARKVYAVE
101: ATKMADHARA LVKANNLDHI VEVIEGSVED ISLPEKVDVI ISEWMGYFLL RESMFDSVIS ARDRWLKPTG VMYPSHARMW LAPIKSNIAD RKRNDFDGAM
201: ADWHNFSDEI KSYYGVDMGV LTKPFAEEQE KYYIQTAMWN DLNPQQIIGT PTIVKEMDCL TASVSEIEEV RSNVTSVINM EHTRLCGFGG WFDVQFSGRK
301: EDPAQQEIEL TTAPSEQHCT HWGQQVFIMS NPINVEEGDN LNLGLLMSRS KENHRLMEIE LNCEIKEASG NPKESFKKTY FIE
Arabidopsis Description
PRMT10PRMT10 [Source:UniProtKB/TrEMBL;Acc:A0A178WKU5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.