CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62812	Soybean	cytosol	92.62	91.59
Bra001445.1-P	Field mustard	cytosol	30.34	63.21
Os07t0640000-01	Rice	cytosol	38.2	59.06
VIT_13s0084g00650.t01	Wine grape	cytosol	59.23	58.66
Bra034765.1-P	Field mustard	cytosol	53.77	56.49
CDY08441	Canola	cytosol	54.09	56.45
CDY42140	Canola	cytosol	53.29	56.37
CDY00764	Canola	cytosol	51.85	56.17
AT3G12270.1	Thale cress	cytosol	53.93	55.91
PGSC0003DMT400008488	Potato	nucleus	54.9	54.9
Zm00001d014027_P001	Maize	cytosol	16.37	54.84
CDX73828	Canola	cytosol	52.49	54.77
Solyc01g096550.2.1	Tomato	cytosol	54.74	54.56
EER96428	Sorghum	cytosol	52.17	52.85
Zm00001d019697_P001	Maize	cytosol	51.36	52.46
TraesCS2B01G172600.1	Wheat	cytosol	49.76	51.58
TraesCS2D01G151900.1	Wheat	cytosol	49.92	51.49
TraesCS2A01G147100.1	Wheat	cytosol	49.6	51.41
KRH17553	Soybean	cytosol	7.06	51.16
GSMUA_Achr3P09300_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.29	50.69
HORVU2Hr1G026200.11	Barley	cytosol	47.99	48.54
CDY49141	Canola	nucleus	19.58	43.42
KRH40914	Soybean	cytosol, plastid	16.37	39.53
KRH74166	Soybean	nucleus	21.67	35.9
KRH49040	Soybean	nucleus	21.67	35.62
KRG89089	Soybean	nucleus	21.83	33.5
KRG90589	Soybean	cytosol, plastid	20.71	31.54
KRH11256	Soybean	endoplasmic reticulum	15.09	30.42
KRH54868	Soybean	cytosol	16.85	28.07
KRH63019	Soybean	cytosol	16.53	27.54
KRH02253	Soybean	cytosol	19.1	22.24
KRH50844	Soybean	cytosol	18.94	22.01
KRH37109	Soybean	cytosol	18.94	21.97
KRH12054	Soybean	cytosol	18.94	21.69
Os07t0640100-01	Rice	mitochondrion	0.32	1.53

Protein Annotations

EntrezGene:100778113	MapMan:17.1.4.1	Gene3D:2.70.160.11	Gene3D:3.40.50.150	EMBL:ACUP02006872	InterPro:Arg_MeTrfase
ncoils:Coil	EnsemblPlantsGene:GLYMA_11G157700	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464
GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008469	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0019919	GO:GO:0032259
GO:GO:0034969	GO:GO:0035242	UniProt:I1LLH0	InterPro:IPR025799	EnsemblPlants:KRH30091	ProteinID:KRH30091
ProteinID:KRH30091.1	PFAM:PF12756	PFAM:PF13649	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF89
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	SUPFAM:SSF57667	UniParc:UPI000233C9A3	InterPro:Znf_C2H2_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr11:+:14090329..14096207

Molecular Weight (calculated)

69927.0 Da

IEP (calculated)

4.301

GRAVY (calculated)

-0.309

Length

623 amino acids

Sequence
(BLAST)

001: MAFGNYKQKQ QQEEEEQEHR MEEDEDESEE EEEQFWDDWE GEDEEGEQRD SEFVCLFCES RYSSCGSLFD HCASLHRFDF HAIRTTLSLD FYASFKLINF
101: IRSLVAENRC WSCGLTCQSN RDLQNHLHDL VDFNEIKTLW NDDRYLIPFM EDDSLLYSFG DCDEEGEDEQ ITPIDEDLIK DLMNIEESIH DDQDVVNKMV
201: VDDDKHEIAS VSNDHLNKAS SSKELINGKD LCCDKDPEGH LMVNSQNHIA KHIKKINESY FGSYSSFGIH REMLSDKVRM DAYGQAILKN PSLLNSAVVM
301: DVGCGTGILS LFSAKAGASR VIAVEASAKM AAVASQIAKD NGLLLSKSQN GVDGFQKGVI EVVHGMVEEI DKTVEVQPHS VDVLLSEWMG YCLLYESMLG
401: SVLYARDRWL KPGGAILPDT ATIFVAGFGK GATSLPFWEN VCDFDMSCIG KELVIDAARI PIVDVVDSQD LVTCSAILQS FDLATMKPNE VDFTATATLE
501: LKPSYSGTCC WCYGVVLWFD TGFTSRFCQE TPAVLSTSPY MPRTHWSQTI LTFREPIAMG FGKGNRGKPE AIGTEVYPAT KIDLRVSIVR STEHRSIDIS
601: LEAAGVEPDG QKRSWPAQLF NLQ

Best Arabidopsis Sequence Match ( AT3G12270.1 )
(BLAST)

001: MAATMVKHEI LNYSEDEEEN YSDEGDWGDW KADDNGIEGG EEEEEDDGDD SESDFLCLFC DSHFVSCDLL FEHCRLSHGF DFHGVRKELK LDFYSSFKLI
101: NYIRSQVAEN MCFSWKIEAD DYKDVKFPWD EEKYLKPFWQ EDSLLYSFAD DEEDEEVTFD REEVMEELQK LGDLSIDVEA LGESSMSNSD KCNINGSKDV
201: TSLSNCNGLK QSSADDLIVN GKDAEPKVCD GRLVNRNIRK VNENYFGSYS SFGIHREMLS DKVRTEAYRD ALLKNPTLLN GSVVMDVGCG TGILSLFAAK
301: AGASRVVAVE ASEKMAKVAT KIAKDNKVFN DNEHNGVLEV AHSMVEELDK SIQIQPHSVD VLVSEWMGYC LLYESMLSSV LYARDRWLKP GGAILPDTAT
401: MFVAGFGKGA TSLPFWEDVY GFDMSSIGKE IHDDTTRLPI VDVIAERDLV TQPTLLQTFD LATMKPDEVD FTATATLEPT ESEAKTRLCH GVVLWFDTGF
501: TSRFCKENPT VLSTSPYTPP THWAQTILTF QEPISVAPAS VLSGNDRREA IGTEECPASS IHLRVSVARA HEHRSIDISL EATGLSSKGQ KRHWPVQIFN
601: L

Arabidopsis Description

PRMT3Probable protein arginine N-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.