CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02253	Soybean	cytosol	97.01	97.2
KRH37109	Soybean	cytosol	82.46	82.31
KRH12054	Soybean	cytosol	82.84	81.62
PGSC0003DMT400021779	Potato	cytosol	59.51	77.62
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	74.44	76.0
Bra037440.1-P	Field mustard	cytosol, plastid	70.52	72.55
CDX86257	Canola	cytosol, plastid	70.71	72.47
AT5G49020.1	Thale cress	cytosol	70.9	71.97
GSMUA_Achr11P...	Banana	cytosol	62.13	71.92
CDX85389	Canola	cytosol	69.78	71.51
PGSC0003DMT400012001	Potato	plastid	69.03	71.02
CDY33934	Canola	cytosol	69.96	70.89
Solyc12g099560.1.1	Tomato	extracellular	68.84	70.69
AT3G06930.2	Thale cress	cytosol	70.34	70.47
Bra029611.1-P	Field mustard	cytosol	69.59	70.24
Bra020667.1-P	Field mustard	cytosol	69.59	70.11
CDY24659	Canola	cytosol	69.4	69.92
CDY05299	Canola	cytosol	69.03	69.81
CDY05647	Canola	cytosol	68.84	69.75
Solyc05g054240.2.1	Tomato	cytosol	67.35	68.5
GSMUA_Achr11P...	Banana	cytosol	68.84	68.33
Os07t0671700-01	Rice	plasma membrane	65.86	66.86
EER97694	Sorghum	cytosol	66.04	65.56
TraesCS2B01G133300.3	Wheat	cytosol	64.37	64.61
TraesCS2A01G114100.1	Wheat	cytosol	64.37	64.37
Zm00001d007133_P002	Maize	cytosol	64.37	62.96
TraesCS2D01G114900.1	Wheat	cytosol	64.55	62.57
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	61.94	62.52
CDY27881	Canola	mitochondrion	21.46	47.13
Bra015140.1-P	Field mustard	mitochondrion	21.46	47.13
KRH17553	Soybean	cytosol	5.97	37.21
Zm00001d022469_P001	Maize	plasma membrane	66.6	33.49
KRH11256	Soybean	endoplasmic reticulum	19.03	33.01
KRH40914	Soybean	cytosol, plastid	15.3	31.78
KRH49040	Soybean	nucleus	21.64	30.61
KRH74166	Soybean	nucleus	21.08	30.05
KRG89089	Soybean	nucleus	22.2	29.31
KRH63019	Soybean	cytosol	20.34	29.14
KRG90589	Soybean	cytosol, plastid	22.01	28.85
KRH54868	Soybean	cytosol	19.96	28.61
CDY51773	Canola	nucleus	37.87	22.63
KRH30091	Soybean	nucleus	22.01	18.94
KRH62812	Soybean	cytosol	21.46	18.25

Protein Annotations

EntrezGene:100807771	MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	EMBL:ACUP02004716	InterPro:Arg_MeTrfase
EnsemblPlantsGene:GLYMA_07G247300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006479
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008469	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0019919	GO:GO:0032259	GO:GO:0034969
GO:GO:0035242	InterPro:IPR025799	UniProt:K7L3P0	EnsemblPlants:KRH50844	ProteinID:KRH50844	ProteinID:KRH50844.1
PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI00029568D7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:42604843..42612595

Molecular Weight (calculated)

59925.5 Da

IEP (calculated)

6.087

GRAVY (calculated)

-0.188

Length

536 amino acids

Sequence
(BLAST)

001: MEESLGQKWK QPEFALASVS DLSLAPSSSA SPGIARFNSD GLQIHHQSHQ IPFNVDPRTV QLFKVSPVLS VCLVEGSDVG KKTLYSRGVT IQFRNDEESA
101: AFHCVVQQWK KEVNAQEGNG RNGTITTSKS KFDDKIESSS SKMYFHYYGQ LLHQQNMLQD YVRTGTYHAA VLENRTDFIG RVVVDVGAGS GILSLFAAQA
201: GAKHVYAVEA SEMAEYARKL IAGNPTLAQR ITVIKGKVED VELPEKADIL ISEPMGTLLV NERMLESYVI ARDRFLVPAG KMFPAVGRIH MAPFTDEYLF
301: IEIANKALFW QQQNYYGVDL TPLHGTAFQG YFSQPVVDAF DPRLLIAPSM FHVIDFTKIK EEELYEIDIP LRFIASVGTR VHGLACWFDV LFDGSTVQRW
401: LTTAPGSPTT HWYQLRCVLS QPIYVMAGQE ITGRLHLIAH NAQSYTIYLT LSAKMWGPGA EQGGILQTSS CKLDLKEPYY RMSQPQAYAL AQDQQSQPLI
501: QTQDIHIQSQ DLDEPEIVQQ PSLNSCAQID SLMRNV

Best Arabidopsis Sequence Match ( AT3G06930.1 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQD IQTPNDELEE ELLQQLPQNP SAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.