CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37109	Soybean	cytosol	93.93	95.16
KRH02253	Soybean	cytosol	82.72	84.11
KRH50844	Soybean	cytosol	81.62	82.84
PGSC0003DMT400021779	Potato	cytosol	59.01	78.1
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	71.51	74.1
GSMUA_Achr11P...	Banana	cytosol	61.58	72.35
Bra037440.1-P	Field mustard	cytosol, plastid	68.93	71.98
CDX86257	Canola	cytosol, plastid	69.12	71.89
AT5G49020.1	Thale cress	cytosol	69.67	71.78
PGSC0003DMT400012001	Potato	plastid	68.38	71.4
CDX85389	Canola	cytosol	68.38	71.13
CDY33934	Canola	cytosol	69.12	71.08
Solyc12g099560.1.1	Tomato	extracellular	68.2	71.07
AT3G06930.2	Thale cress	cytosol	69.49	70.65
CDY05647	Canola	cytosol	68.38	70.32
Solyc05g054240.2.1	Tomato	cytosol	68.01	70.21
Bra020667.1-P	Field mustard	cytosol	68.57	70.11
Bra029611.1-P	Field mustard	cytosol	68.2	69.87
CDY05299	Canola	cytosol	67.83	69.62
CDY24659	Canola	cytosol	68.01	69.55
Os07t0671700-01	Rice	plasma membrane	66.54	68.56
GSMUA_Achr11P...	Banana	cytosol	68.01	68.52
EER97694	Sorghum	cytosol	66.18	66.67
TraesCS2B01G133300.3	Wheat	cytosol	64.15	65.36
TraesCS2A01G114100.1	Wheat	cytosol	64.15	65.11
Zm00001d007133_P002	Maize	cytosol	64.52	64.05
TraesCS2D01G114900.1	Wheat	cytosol	64.34	63.29
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	61.76	63.28
CDY27881	Canola	mitochondrion	20.96	46.72
Bra015140.1-P	Field mustard	mitochondrion	20.96	46.72
KRH17553	Soybean	cytosol	5.7	36.05
Zm00001d022469_P001	Maize	plasma membrane	66.73	34.05
KRH11256	Soybean	endoplasmic reticulum	19.12	33.66
KRH49040	Soybean	nucleus	21.69	31.13
KRH40914	Soybean	cytosol, plastid	14.71	31.01
KRH74166	Soybean	nucleus	21.14	30.59
KRG89089	Soybean	nucleus	22.06	29.56
KRH63019	Soybean	cytosol	19.67	28.61
KRH54868	Soybean	cytosol	19.67	28.61
KRG90589	Soybean	cytosol, plastid	21.51	28.61
CDY51773	Canola	nucleus	35.66	21.63
KRH30091	Soybean	nucleus	21.69	18.94
KRH62812	Soybean	cytosol	21.14	18.25

Protein Annotations

EntrezGene:100818828	MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	EMBL:ACUP02009261	InterPro:Arg_MeTrfase
EnsemblPlantsGene:GLYMA_15G148200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006479
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008469	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0019919	GO:GO:0032259	GO:GO:0034969
GO:GO:0035242	UniProt:I1MGL5	InterPro:IPR025799	EnsemblPlants:KRH12054	ProteinID:KRH12054	ProteinID:KRH12054.1
PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI000233BE61	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:12189394..12197241

Molecular Weight (calculated)

60576.2 Da

IEP (calculated)

5.128

GRAVY (calculated)

-0.192

Length

544 amino acids

Sequence
(BLAST)

001: MLEGGAIMED SAAQKRKQQE FALASVSEVS SAPSSASPGV ALFAGDRLQI RNESHRVALN AHLSDIQLFR LGPIESVCMV EGSEADKQTS YSSGVAIQFR
101: NEEESEAFHC VFQQWKKGFD VQGGNLPNGT DVITSKSKFD EKIEPSSAKM YFHYYGQLLH QQNMLQDYVR TGTYYAAVLE NRADFVGRVV VDVGAGSGIL
201: SLFAAQAGAK HVYAVEASEM AEYARKLVAG NPILGQRITV IKGKVEDVEL PEKADILISE PMGTLLVNER MLESYVIARD RFLIPNGKMF PTVGRIHMAP
301: FSDEYLFVEI ANKALFWQQQ NYYGVDLTPL HGTAFQGYFS QPVVDAFDPR LLIAAPMFHV LDFTKIKEEE LYEIDIPLRF TATVGARLHG LACWFDVLFN
401: GSTARRWLTT APGSPTTHWY QLRCVLSQPI YVMAGQEITG RMHLIAHTAQ SYTIFLTLSA KTWGPGAEQG GILQTSSCKL DLKEPYYRMS QPQAYPLTQD
501: QQPQPFLQTQ DIDIQSQDLD EVEIMQQPSP KSCAQIDSLM QNAS

Best Arabidopsis Sequence Match ( AT3G06930.1 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQD IQTPNDELEE ELLQQLPQNP SAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.