CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007133_P002	Maize	cytosol	94.26	92.88
Os07t0671700-01	Rice	plasma membrane	86.3	88.26
TraesCS2B01G133300.3	Wheat	cytosol	85.19	86.14
TraesCS2A01G114100.1	Wheat	cytosol	85.19	85.82
TraesCS2D01G114900.1	Wheat	cytosol	85.19	83.18
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	78.7	80.04
GSMUA_Achr11P...	Banana	cytosol	64.26	74.95
PGSC0003DMT400021779	Potato	cytosol	55.74	73.24
GSMUA_Achr11P...	Banana	cytosol	68.89	68.89
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	65.19	67.05
KRH02253	Soybean	cytosol	66.11	66.73
KRH37109	Soybean	cytosol	66.11	66.48
KRH12054	Soybean	cytosol	66.67	66.18
KRH50844	Soybean	cytosol	65.56	66.04
Solyc12g099560.1.1	Tomato	extracellular	63.52	65.71
Bra029611.1-P	Field mustard	cytosol	64.07	65.16
PGSC0003DMT400012001	Potato	plastid	62.78	65.07
CDY24659	Canola	cytosol	64.07	65.04
CDY05299	Canola	cytosol	63.33	64.53
AT3G06930.2	Thale cress	cytosol	63.89	64.49
CDX86257	Canola	cytosol, plastid	61.85	63.86
CDX85389	Canola	cytosol	61.85	63.86
Bra037440.1-P	Field mustard	cytosol, plastid	61.48	63.72
Solyc05g054240.2.1	Tomato	cytosol	61.85	63.38
CDY05647	Canola	cytosol	62.04	63.33
AT5G49020.1	Thale cress	cytosol	61.85	63.26
CDY33934	Canola	cytosol	61.67	62.95
Bra020667.1-P	Field mustard	cytosol	61.67	62.59
Zm00001d022469_P001	Maize	plasma membrane	93.15	47.19
CDY27881	Canola	mitochondrion	20.74	45.9
Bra015140.1-P	Field mustard	mitochondrion	20.74	45.9
EER87820	Sorghum	cytosol	22.41	31.93
EER98789	Sorghum	cytosol	20.56	28.91
EES11648	Sorghum	mitochondrion	20.56	28.61
OQU91600	Sorghum	cytosol	20.19	27.05
CDY51773	Canola	nucleus	35.74	21.52
EER96428	Sorghum	cytosol	20.37	17.89

Protein Annotations

MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	InterPro:Arg_MeTrfase	UniProt:C5X4W2	EnsemblPlants:EER97694
ProteinID:EER97694	ProteinID:EER97694.2	GO:GO:0003674	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005856
GO:GO:0006139	GO:GO:0006259	GO:GO:0006464	GO:GO:0006479	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008290	GO:GO:0009058	GO:GO:0009987	GO:GO:0016035
GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	GO:GO:0042276	GO:GO:0051016
InterPro:IPR025799	ProteinID:KXG36921.2	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF10
InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3002G412700	SUPFAM:SSF53335	UniParc:UPI0003C69EE2	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:76055982..76064028

Molecular Weight (calculated)

59429.7 Da

IEP (calculated)

5.129

GRAVY (calculated)

-0.151

Length

540 amino acids

Sequence
(BLAST)

001: MASSPDLFPN VAFSDVSAPA DVPAAEGATA AFGLGAATGA PRLSLVKAGK AEAESTVEID LADAQVFKLG PREWLCVCDE SEAKAGVEVK SFSRAIKVVL
101: RTEAESKAFS LAFQRWKHQV ISGKAGERLE NGSIIASKSK FDTKIEASSA KMYFHYYGQL LHQQNMLQDF VRTGTYYAAV MENRSDFEGR IVVDVGAGSG
201: ILSLFAAQAG ARHVYAVEAS EMAEHAQRLI SGNPSLGQRI TVIKGKVEEV ELPEKADILI SEPMGTLLVN ERMLESYVIA RDRFLAPDGK MFPTTGRIHM
301: APFSDEYLYV EMANKALFWQ QHNFFGVDLT PLHGSAFQGY FSQPVVDAFD PRLLISPPTY HTLDFTSMKE EELYEIDIPL SFVASVGTRV HGLACWFDVL
401: FNGSTVQRWL TTAPGSPTTH WYQLRCVLSQ PLYVMAGQEI TGRLHLVAHS SQSYTIYLTM SAKMWGVGAE QGGILQTSTG KLELKEPYYR LSQPQSYMLP
501: QDQQQQQLPS LQAQGSEQQM QEGLSPGITI DQVDQDCGLN

Best Arabidopsis Sequence Match ( AT3G06930.1 )
(BLAST)

001: MEVSSVKKLE QLEYSLESVT DLSSSSVSSS SPAVATFSYV DGVTELRFLQ SDSTHCFNFD LASAQLFKLG PVHFICVSDG SSSSEEKSFS KGVNIKFKNE
101: KDSKDFCESF EEWRNDSVVQ GSSLQNGTVS ANKSKFDNKI EASSAKMYFH YYGQLLHQQN MLQDYVRTGT YYAAVMENHS DFAGRVVVDV GAGSGILSMF
201: AAQAGAKHVY AVEASEMAEY ARKLIAGNPL FADRITVIKG KVEDIELPEK ADILISEPMG TLLVNERMLE SYVIARDRFM TPKGKMFPTV GRIHMAPFSD
301: EFLFIEMANK AMFWQQQNYY GVDLTPLYGS AHQGYFSQPV VDAFDPRLLV ASPMFHMIDF TQMKEEDFYE IDIPLKFTAS MCTRMHGLAC WFDVLFDGST
401: VQRWLTTAPG APTTHWYQIR CVLSQPIYVM AGQEITGRLH LIAHSAQSYT IDLTLSAKMW GPGASQGGIL QSSTCKFDLK EPYYRMSQPQ AYPVAQEPPL
501: QPQPELSTQD IQTPNDELEE ELLQQLPQNP SAQL

Arabidopsis Description

PRMT13Probable histone-arginine methyltransferase 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84W92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.