CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032633_P004	Maize	mitochondrion	94.79	94.79
TraesCS1A01G171700.1	Wheat	cytosol	89.08	90.43
TraesCS1D01G172200.1	Wheat	cytosol	88.83	90.18
Os10t0489100-01	Rice	cytosol, nucleus	87.1	88.86
TraesCS1B01G185000.1	Wheat	peroxisome	63.52	87.67
HORVU1Hr1G044440.3	Barley	plastid	85.61	81.56
GSMUA_AchrUn_...	Banana	cytosol, vacuole	9.18	72.55
KRH17553	Soybean	cytosol	14.89	69.77
GSMUA_AchrUn_...	Banana	cytosol	41.19	68.59
KRG89089	Soybean	nucleus	61.79	61.33
VIT_10s0071g00750.t01	Wine grape	cytosol	60.79	59.18
CDY24566	Canola	cytosol	61.79	58.31
CDY36064	Canola	cytosol	61.54	58.08
EES11648	Sorghum	mitochondrion	55.83	57.99
CDY25372	Canola	cytosol	61.29	57.85
Bra035822.1-P	Field mustard	cytosol	61.29	57.85
CDX82265	Canola	cytosol	60.79	57.65
Solyc04g008860.2.1	Tomato	nucleus	60.79	56.84
Bra001772.1-P	Field mustard	cytosol	61.04	56.68
KRH11256	Soybean	endoplasmic reticulum	43.42	56.63
KRH40914	Soybean	cytosol, plastid	35.24	55.04
AT3G20020.3	Thale cress	cytosol	60.3	54.85
KRG90589	Soybean	cytosol, plastid	55.58	54.77
GSMUA_Achr5P10850_001	Banana	cytosol, golgi, plastid	43.42	53.03
GSMUA_Achr5P10840_001	Banana	cytosol	56.08	51.72
CDY33443	Canola	cytosol, endoplasmic reticulum, peroxisome	26.05	41.18
EER98789	Sorghum	cytosol	33.99	35.68
EER87820	Sorghum	cytosol	30.02	31.93
CDY42226	Canola	endoplasmic reticulum, extracellular	11.41	31.72
EER96428	Sorghum	cytosol	31.02	20.33
EER97694	Sorghum	cytosol	27.05	20.19

Protein Annotations

Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:35.1	UniProt:A0A1B6QK28	InterPro:Arg_MeTrfase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	InterPro:IPR025799	ProteinID:KXG38283.1
InterPro:Methyltranfer_dom	ProteinID:OQU91597.1	ProteinID:OQU91598.1	ProteinID:OQU91599.1	EnsemblPlants:OQU91600	ProteinID:OQU91600
ProteinID:OQU91600.1	PFAM:PF13847	PFscan:PS51678	PANTHER:PTHR11006	PANTHER:PTHR11006:SF70	InterPro:SAM-dependent_MTases
EnsemblPlantsGene:SORBI_3001G211900	SUPFAM:SSF53335	UniParc:UPI0003C6D358	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:19508634..19517283

Molecular Weight (calculated)

44895.9 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.161

Length

403 amino acids

Sequence
(BLAST)

001: MFTAGADGNG HLPRPRRSRR GGVGHAGVMG SPQGQVALGA HPHPAAPPCT DYDVAYFKAY SHIGVHEEML KDHVRTSTYR NAIMHHKDLI SGKVVLDVGC
101: GTGVLSIFCA FAGATRVYAV DASDIALQAM EIVRENELSD KVVVLHGRIE DVNIEEKVDV IISEWMGYML LYESMLGSII FARDKWLKPG GLILPSHASL
201: YMAPVTNSQR YHDSIYFWRD VYGIKMSSMM PLAKQCAFME PSVETISGEN VLTWPTVVAQ VDCYTIQAQE LETITAAFKF TSMLQAPLHG FAFWFDVEFN
301: GPVRQKSKKQ PSQSLDGNTQ NASPSSKKKK PDVSIVLSTA PEDAPTHWQQ TLLYLFEPIE LNKDQIIEGS VTISQSQQHA RFLNICLKYF TGDQWYVKES
401: VMR

Best Arabidopsis Sequence Match ( AT3G20020.1 )
(BLAST)

001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSSAGRSFVK ESVMR

Arabidopsis Description

ATPRMT6PRMT6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.