Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol, vacuole | 8.28 | 23.53 |
| CDY33443 | Canola | cytosol, endoplasmic reticulum, peroxisome | 37.93 | 21.57 |
| KRH40914 | Soybean | cytosol, plastid | 28.28 | 15.89 |
| TraesCS1B01G185000.1 | Wheat | peroxisome | 31.72 | 15.75 |
| CDY25372 | Canola | cytosol | 43.45 | 14.75 |
| CDY36064 | Canola | cytosol | 43.45 | 14.75 |
| CDX82265 | Canola | cytosol | 42.76 | 14.59 |
| CDY24566 | Canola | cytosol | 42.76 | 14.52 |
| AT3G20020.3 | Thale cress | cytosol | 41.38 | 13.54 |
| KRG89089 | Soybean | nucleus | 35.86 | 12.81 |
| VIT_10s0071g00750.t01 | Wine grape | cytosol | 35.86 | 12.56 |
| Solyc04g008860.2.1 | Tomato | nucleus | 37.24 | 12.53 |
| Os10t0489100-01 | Rice | cytosol, nucleus | 32.41 | 11.9 |
| TraesCS1D01G172200.1 | Wheat | cytosol | 32.41 | 11.84 |
| TraesCS1A01G171700.1 | Wheat | cytosol | 32.41 | 11.84 |
| OQU91600 | Sorghum | cytosol | 31.72 | 11.41 |
| Zm00001d032633_P004 | Maize | mitochondrion | 31.72 | 11.41 |
| HORVU1Hr1G044440.3 | Barley | plastid | 31.72 | 10.87 |
| EES11648 | Sorghum | mitochondrion | 28.97 | 10.82 |
| TraesCS2B01G590000.1 | Wheat | mitochondrion | 28.28 | 10.79 |
| KRG90589 | Soybean | cytosol, plastid | 30.34 | 10.76 |
| TraesCS2A01G554100.1 | Wheat | mitochondrion | 28.97 | 10.74 |
| TraesCS2D01G560200.1 | Wheat | mitochondrion | 28.97 | 10.69 |
| Zm00001d026614_P001 | Maize | mitochondrion | 26.9 | 10.08 |
| GSMUA_Achr5P10840_001 | Banana | cytosol | 29.66 | 9.84 |
| CDX82711 | Canola | cytosol | 24.14 | 9.7 |
| CDY35877 | Canola | cytosol | 24.14 | 9.64 |
| CDY27881 | Canola | mitochondrion | 15.86 | 9.43 |
| CDY06802 | Canola | cytosol | 24.83 | 9.25 |
| CDY49141 | Canola | nucleus | 17.93 | 9.25 |
| CDY43510 | Canola | cytosol | 24.83 | 9.23 |
| Os04t0677066-00 | Rice | nucleus | 24.83 | 9.16 |
| CDY47762 | Canola | cytosol | 22.76 | 8.51 |
| CDY30213 | Canola | cytosol | 22.07 | 8.18 |
| CDY66138 | Canola | cytosol, peroxisome, plastid | 21.38 | 8.07 |
| CDY14208 | Canola | cytosol | 17.93 | 7.9 |
| HORVU2Hr1G119480.1 | Barley | cytosol | 18.62 | 7.14 |
| CDX73828 | Canola | cytosol | 26.21 | 6.37 |
| CDY08441 | Canola | cytosol | 26.21 | 6.37 |
| GSMUA_Achr5P10850_001 | Banana | cytosol, golgi, plastid | 14.48 | 6.36 |
| CDY42140 | Canola | cytosol | 25.52 | 6.28 |
| CDY03574 | Canola | cytosol | 12.41 | 6.27 |
| CDY00764 | Canola | cytosol | 24.83 | 6.26 |
| KRH11256 | Soybean | endoplasmic reticulum | 13.1 | 6.15 |
| CDX86257 | Canola | cytosol, plastid | 19.31 | 5.35 |
| CDY71180 | Canola | cytosol | 8.28 | 5.22 |
| CDY05299 | Canola | cytosol | 18.62 | 5.09 |
| CDY24659 | Canola | cytosol | 18.62 | 5.08 |
| CDX85389 | Canola | cytosol | 17.93 | 4.97 |
| CDY33934 | Canola | cytosol | 17.93 | 4.91 |
| CDY05647 | Canola | cytosol | 17.24 | 4.73 |
| CDY51773 | Canola | nucleus | 20.69 | 3.34 |
| KRH17553 | Soybean | cytosol | 0.69 | 1.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 1.38 | 0.83 |
| CDY71161 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY42226 | EnsemblPlantsGene:GSBRNA2T00074443001 | Gene3D:3.40.50.150 | GO:A0A078HWU3 | PANTHER:PTHR11006 | PANTHER:PTHR11006:SF73 |
| ProteinID:CDY42226 | ProteinID:CDY42226.1 | UniParc:UPI0004EE3E00 | UniProt:A0A078HWU3 | MapMan:35.1 | : |
Description
BnaA01g25690DBnaA01g25690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWU3]
Coordinates
chrLK032518:-:254454..256074
Molecular Weight (calculated)
16438.9 Da
IEP (calculated)
8.097
GRAVY (calculated)
-0.089
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDKLFFCLV QICFFSYIIR RRIQQRFPDT RDGLATNGLS ISEQLGEQKS PETPKSPLPC TDFDAAYSHS YAHVRIHEEM IKASQHHSRV TVAFSSLQMI
101: LKEKKIVYAV DASDIAVQAE EVLKANGLSD KVIVLHGRVE IISFL
101: LKEKKIVYAV DASDIAVQAE EVLKANGLSD KVIVLHGRVE IISFL
001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSSAGRSFVK ESVMR
101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQAKEVV KANGLSDKVI VLHGRVEDVE IDEEVDVIIS EWMGYMLLYE
201: SMLGSVITAR DRWLKPGGLI LPSHATLYMA PISHPDRYSH SIDFWRNVYG IDMSAMMQLA KQCAFEEPSV ESISGENVLT WPEVVKHIDC KTIKIQELDS
301: VTARYKFNSM MRAPMHGFAF WFDVEFSGPA SSPAKNTSET SIASGSSSIS PSGEVNQKKR TNPSDALVLS TSPESPPTHW QQTIVYFYDP IDVEQDQVIE
401: GSVTLSQSKE NKRFMNIHLE YSSAGRSFVK ESVMR
Arabidopsis Description
ATPRMT6PRMT6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.