Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30213 | Canola | cytosol | 97.68 | 96.93 |
| Bra024143.1-P | Field mustard | cytosol | 96.13 | 95.89 |
| CDY43510 | Canola | cytosol | 93.3 | 92.82 |
| CDY06802 | Canola | cytosol | 93.04 | 92.8 |
| CDY14208 | Canola | cytosol | 75.52 | 89.06 |
| CDY03574 | Canola | cytosol | 65.72 | 88.85 |
| AT4G29510.1 | Thale cress | cytosol | 88.66 | 88.21 |
| Zm00001d020188_P001 | Maize | extracellular | 64.95 | 82.35 |
| CDX82711 | Canola | cytosol | 76.29 | 81.99 |
| CDY35877 | Canola | cytosol | 76.29 | 81.54 |
| VIT_11s0016g02530.t01 | Wine grape | cytosol | 70.88 | 78.57 |
| KRH74166 | Soybean | nucleus | 73.97 | 76.33 |
| KRH49040 | Soybean | nucleus | 74.23 | 75.99 |
| TraesCS5B01G187400.1 | Wheat | cytosol | 72.68 | 74.21 |
| TraesCS5A01G196000.2 | Wheat | cytosol | 72.68 | 74.21 |
| TraesCS5D01G195000.1 | Wheat | cytosol | 72.42 | 73.95 |
| Os09t0359800-01 | Rice | cytosol | 73.71 | 73.9 |
| HORVU5Hr1G056790.7 | Barley | cytosol | 72.68 | 73.63 |
| EER98789 | Sorghum | cytosol | 72.42 | 73.18 |
| Solyc07g032240.2.1 | Tomato | cytosol | 70.36 | 72.8 |
| PGSC0003DMT400000915 | Potato | cytosol | 72.68 | 71.21 |
| GSMUA_Achr6P22570_001 | Banana | cytosol | 71.13 | 71.13 |
| Solyc12g008760.1.1 | Tomato | cytosol | 72.42 | 70.96 |
| PGSC0003DMT400021726 | Potato | cytosol | 71.13 | 69.17 |
| CDY24566 | Canola | cytosol | 36.86 | 33.49 |
| CDY25372 | Canola | cytosol | 36.6 | 33.26 |
| CDX82265 | Canola | cytosol | 36.34 | 33.18 |
| CDY36064 | Canola | cytosol | 36.34 | 33.02 |
| CDY66138 | Canola | cytosol, peroxisome, plastid | 29.64 | 29.95 |
| CDY33443 | Canola | cytosol, endoplasmic reticulum, peroxisome | 19.59 | 29.8 |
| CDY27881 | Canola | mitochondrion | 16.24 | 25.82 |
| CDY42140 | Canola | cytosol | 35.05 | 23.09 |
| CDY00764 | Canola | cytosol | 34.02 | 22.96 |
| CDY08441 | Canola | cytosol | 35.31 | 22.95 |
| CDY42226 | Canola | endoplasmic reticulum, extracellular | 8.51 | 22.76 |
| CDX85389 | Canola | cytosol | 30.41 | 22.56 |
| CDX86257 | Canola | cytosol, plastid | 30.15 | 22.37 |
| CDX73828 | Canola | cytosol | 34.02 | 22.11 |
| CDY71180 | Canola | cytosol | 12.89 | 21.74 |
| CDY33934 | Canola | cytosol | 29.64 | 21.74 |
| CDY05647 | Canola | cytosol | 29.64 | 21.74 |
| CDY05299 | Canola | cytosol | 28.87 | 21.13 |
| CDY24659 | Canola | cytosol | 28.87 | 21.05 |
| CDY71161 | Canola | cytosol | 6.44 | 17.12 |
| CDY49141 | Canola | nucleus | 8.51 | 11.74 |
| CDY51773 | Canola | nucleus | 23.45 | 10.14 |
Protein Annotations
| MapMan:12.3.4.1 | Gene3D:2.70.160.11 | Gene3D:3.40.50.150 | GO:A0A078ICA6 | UniProt:A0A078ICA6 | InterPro:Arg_MeTrfase |
| EnsemblPlants:CDY47762 | ProteinID:CDY47762 | ProteinID:CDY47762.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0006479 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0032259 | EnsemblPlantsGene:GSBRNA2T00088057001 | InterPro:IPR025799 | PFAM:PF06325 | PFscan:PS51678 |
| PANTHER:PTHR11006 | PANTHER:PTHR11006:SF53 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI0004EF3783 | SEG:seg |
Description
BnaC07g41980DBnaC07g41980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICA6]
Coordinates
chrLK032734:-:1074..3284
Molecular Weight (calculated)
43783.1 Da
IEP (calculated)
4.859
GRAVY (calculated)
-0.309
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKKKNNNNE EGEEFVSFGH NLNTKIRFED ADEDEAAQGS AEDATAQDES MCDAADGTTD DTTSADYYFD SYSHFGLYLL QEMLKDVVRT KTYQNVIYQN
101: KFLIKDKVVL DVGAGTGILS LFCAKAGAKH VYAVECSQMA DMAKEIVKAN GFSDVITVLK GKIEEIELPT PKVEVIISEW MGYFLLFENM LDSVLYARNK
201: WLVDGGIVLP DKASLFLTAI EDSEYKEDKI EFWNSVYGFD MSCIKKKAMM EPLVDTVDQK QIVTDSRLLK TMDISKMSSG DASFTAPFKL VAQRNDYIHA
301: LVAYFDVSFT MCHKLLGFST GPKSRATHWK QTVMYLEDVL TICEGETITG SMSVSYNKKN PRDIDIKLSY SLDGQHSKVS RTQHYKMR
101: KFLIKDKVVL DVGAGTGILS LFCAKAGAKH VYAVECSQMA DMAKEIVKAN GFSDVITVLK GKIEEIELPT PKVEVIISEW MGYFLLFENM LDSVLYARNK
201: WLVDGGIVLP DKASLFLTAI EDSEYKEDKI EFWNSVYGFD MSCIKKKAMM EPLVDTVDQK QIVTDSRLLK TMDISKMSSG DASFTAPFKL VAQRNDYIHA
301: LVAYFDVSFT MCHKLLGFST GPKSRATHWK QTVMYLEDVL TICEGETITG SMSVSYNKKN PRDIDIKLSY SLDGQHSKVS RTQHYKMR
001: MTKNSNHDEN EFISFEPNQN TKIRFEDADE DEVAEGSGVA GEETPQDESM FDAGESADTA EVTDDTTSAD YYFDSYSHFG IHEEMLKDVV RTKTYQNVIY
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR
101: QNKFLIKDKI VLDVGAGTGI LSLFCAKAGA AHVYAVECSQ MADMAKEIVK ANGFSDVITV LKGKIEEIEL PTPKVDVIIS EWMGYFLLFE NMLDSVLYAR
201: DKWLVEGGVV LPDKASLHLT AIEDSEYKED KIEFWNSVYG FDMSCIKKKA MMEPLVDTVD QNQIVTDSRL LKTMDISKMS SGDASFTAPF KLVAQRNDYI
301: HALVAYFDVS FTMCHKLLGF STGPKSRATH WKQTVLYLED VLTICEGETI TGTMSVSPNK KNPRDIDIKL SYSLNGQHCK ISRTQHYKMR
Arabidopsis Description
PRMT11Protein arginine N-methyltransferase 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.