Factsheet for Zm00001d022469_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97694	Sorghum	cytosol	47.19	93.15
Zm00001d007133_P002	Maize	cytosol	47.28	91.97
Os07t0671700-01	Rice	plasma membrane	42.96	86.74
TraesCS2B01G133300.3	Wheat	cytosol	42.4	84.64
TraesCS2A01G114100.1	Wheat	cytosol	42.31	84.14
TraesCS2D01G114900.1	Wheat	cytosol	42.5	81.92
HORVU2Hr1G019780.1	Barley	cytosol, mitochondrion	39.21	78.72
GSMUA_Achr11P...	Banana	cytosol	32.74	75.38
PGSC0003DMT400021779	Potato	cytosol	28.52	73.97
GSMUA_Achr11P...	Banana	cytosol	35.18	69.44
KRH02253	Soybean	cytosol	33.77	67.29
VIT_05s0020g01540.t01	Wine grape	cytosol, plastid	33.02	67.05
KRH37109	Soybean	cytosol	33.77	67.04
KRH12054	Soybean	cytosol	34.05	66.73
KRH50844	Soybean	cytosol	33.49	66.6
Solyc12g099560.1.1	Tomato	extracellular	32.46	66.28
PGSC0003DMT400012001	Potato	plastid	32.27	66.03
Bra029611.1-P	Field mustard	cytosol	32.36	64.97
CDY24659	Canola	cytosol	32.36	64.85
CDY05299	Canola	cytosol	32.08	64.53
AT3G06930.2	Thale cress	cytosol	32.27	64.3
CDX85389	Canola	cytosol	31.33	63.86
Solyc05g054240.2.1	Tomato	cytosol	31.52	63.76
Bra037440.1-P	Field mustard	cytosol, plastid	31.14	63.72
CDX86257	Canola	cytosol, plastid	31.24	63.67
AT5G49020.1	Thale cress	cytosol	31.43	63.45
CDY05647	Canola	cytosol	31.33	63.14
CDY33934	Canola	cytosol	31.24	62.95
Bra020667.1-P	Field mustard	cytosol	31.24	62.59
CDY27881	Canola	mitochondrion	10.13	44.26
Bra015140.1-P	Field mustard	mitochondrion	10.13	44.26
Zm00001d020188_P001	Maize	extracellular	9.47	33.01
Zm00001d036131_P001	Maize	cytosol	11.26	31.83
Zm00001d014027_P001	Maize	cytosol	5.07	29.03
Zm00001d026614_P001	Maize	mitochondrion	10.41	28.68
Zm00001d032633_P004	Maize	mitochondrion	10.04	26.55
CDY51773	Canola	nucleus	18.2	21.63
Zm00001d019697_P001	Maize	cytosol	10.51	18.36

Protein Annotations

EntrezGene:100191934	MapMan:12.3.4.2	Gene3D:2.70.160.11	Gene3D:3.40.50.150	MapMan:5.9.5	UniProt:A0A1D6IN33
InterPro:Arg_MeTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0006479	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259
InterPro:IPR025799	ProteinID:ONM60691.1	PFAM:PF05755	PFAM:PF06325	PFscan:PS51678	PANTHER:PTHR11006
PANTHER:PTHR11006:SF10	InterPro:REF	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000844DA73	EnsemblPlantsGene:Zm00001d022469
EnsemblPlants:Zm00001d022469_P001	EnsemblPlants:Zm00001d022469_T001	SEG:seg	:	:	:

Description

Probable histone-arginine methyltransferase 1.4

Coordinates

chr7:-:178246469..178259200

Molecular Weight (calculated)

117067.0 Da

IEP (calculated)

8.183

GRAVY (calculated)

-0.185

Length

1066 amino acids

Sequence
(BLAST)

0001: MASSPDLFPN VAFSDVSAAA PAAEATAAFG LGATTGAPRL CLVKSGKDEA EPTVDIDLAD AQVVAVIPVN VFKLGPMEWL CVCDESEAKA GVEEYILNGF
0101: MLTLSSLRQK SFSRAIKVVL RTEAESKAFS LAFQQWKHQV ISGKAGERLE NGSIIASKSK FDTKIEASSA KMYFHYYGQL LHQQNMLQDF VRTGTYYAAV
0201: MENRSDFEGR VVVDVGAGSG ILSLFAAQAG ARHVYAVEAS EMAENAQRLM SGNPSLGQRI TVIRGKVEEV ELPEKADILI SEPMGTLLVN ERMLESYVIA
0301: RDRFLAPDGK MFPTTGRGDC EQISREGEKD ESRDSGSKGR QWRVIHMAPF SDEYLYVEIA NKALFWQQHN FFGVDLTPLH GSAFQGYFSQ PVVDAFDPRL
0401: LISPPIYHTL DFTSMKEEEL YEIDIPLSFV ASVGTRVHGL ACWFDVLFNG STVQRWLTTA PGSPTTHWYQ LRCVLSQPLY VMAGQEITGR LHLVAHSAQS
0501: YTIYLTMSAK MWGVGAEQGG ILQTSTGKLE LKEPYYRLSQ PQSYMLPQDQ QQQQQLSSLQ PHSSWLKPGS DLNLPGVRSV GKQQESYTRE SRAGRSARSR
0601: SASNGAAGNG ISRPSQPACF HQLWKRFPCV PCRLVVAKKL SSTGSIDLST VVPKSVDRTC RQIFCCLTSK QNCEGCHASS FLPTVVPKTV DDISYVCSLI
0701: KIVLHSHPKF LEPGFDARHH RLWPTSGSAL QFEPLAHRSI RAIREKKRHR PVTPLATCPS RSGYVSVPLQ SVLAQPGRFL LLFPQPGLPT RFHRSRVAKR
0801: IPCLVRAMAE EQSNPQHQQA EEREVMVEQQ QPRRAPKLRY LDFVQVAAAQ AAVCLAGLYG LAKDHAGPLR PSVDAVESAV KGVVSPVYDR FGGLPLDVLA
0901: FVDRKVDDTV HEVDKHLPGA LKAASAHVYA VVRGVPEVAR ELAAEAQRSG VRGAARAALA MTEPVARDVY GRVEPVAKDL YVRYEPAAEH LAVSAWRSLN
1001: GLPVFPHVAE IVVPTAAHWA DKYNRAVAAA AEHGYAGAKY LPAIPTERIA KVFSSAPEAE PLAEGQ

Best Arabidopsis Sequence Match ( AT3G05500.1 )
(BLAST)

001: MATQTDLAQP KLDMTKEEKE RLKYLQFVQA AAVEALLRFA LIYAKAKDKS GPLKPGVESV EGAVKTVVGP VYEKYHDVPV EVLKYMDQKV DMSVTELDRR
101: VPPVVKQVSA QAISAAQIAP IVARALASEV RRAGVVETAS GMAKSVYSKY EPAAKELYAN YEPKAEQCAV SAWKKLNQLP LFPRLAQVAV PTAAFCSEKY
201: NDTVVKAAEK GYRVTSYMPL VPTERISKIF AEEKAETEPL EFHPLD

Arabidopsis Description

REF/SRPP-like protein At3g05500 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA63]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.