Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92965 | Sorghum | plastid | 57.36 | 58.96 |
| TraesCS6B01G079400.1 | Wheat | cytosol | 39.53 | 43.97 |
| TraesCS5B01G069400.1 | Wheat | cytosol | 39.15 | 43.53 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G347500.1 | EnsemblPlantsGene:TraesCS4B01G347500 | Gene3D:1.20.5.110 | InterPro:IPR000727 | InterPro:T_SNARE_dom | ncoils:Coil |
| PANTHER:PTHR19957 | PANTHER:PTHR19957:SF207 | PFAM:PF05739 | PFscan:PS50192 | SMART:SM00397 | SUPFAM:SSF58038 |
| TIGR:cd15841 | TMHMM:TMhelix | MapMan:22.7.4.1 | : | : | : |
Description
No Description!
Coordinates
chr4B:+:641400733..641402231
Molecular Weight (calculated)
29428.9 Da
IEP (calculated)
9.295
GRAVY (calculated)
-0.417
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNVNRPHPV LPMATFQPKG FAPSPAPSPL EQWTKRFQEA ERLVEEVMGN IAERGSVPAS LPLELKRRTG EIRRKVAILE TRLSLMREDL DRLPNRNVKE
101: MRKLAEKFDA LELKVKEVAA PFTMKKHSSN RNELLGPSDH RCTVVDIKST ANMENQEIVQ LQRNIMKEQD ECLDRLEETI VSTKHIALAI NEELDLHVRL
201: IDDLDERVED TSTQLQRAQK KLKSLNTRMR KSGSCTGILM TVIAGVIFVA VVWALIKF
101: MRKLAEKFDA LELKVKEVAA PFTMKKHSSN RNELLGPSDH RCTVVDIKST ANMENQEIVQ LQRNIMKEQD ECLDRLEETI VSTKHIALAI NEELDLHVRL
201: IDDLDERVED TSTQLQRAQK KLKSLNTRMR KSGSCTGILM TVIAGVIFVA VVWALIKF
001: MASSSDSWMR AYNEALKLSE EINGMISERS SSAVTGPDAQ RRASAIRRKI TIFGNKLDSL QSLLAEIHGK PISEKEMNRR KDMVGNLRSK ANQMANALNM
101: SNFANRDSLL GPDIKPDDSM SRVTGMDNQG IVGYQRQVMR EQDEGLEQLE GTVMSTKHIA LAVSEELDLQ TRLIDDLDYH VDVTDSRLRR VQKSLAVMNK
201: NMRSGCSCMS MLLSVLGIVG LAVVIWMLVK YM
101: SNFANRDSLL GPDIKPDDSM SRVTGMDNQG IVGYQRQVMR EQDEGLEQLE GTVMSTKHIA LAVSEELDLQ TRLIDDLDYH VDVTDSRLRR VQKSLAVMNK
201: NMRSGCSCMS MLLSVLGIVG LAVVIWMLVK YM
Arabidopsis Description
SYP51SYP51 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ29]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.