Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0207000-01 | Rice | cytosol | 34.92 | 80.0 |
| GSMUA_Achr3P13340_001 | Banana | cytosol | 36.51 | 68.66 |
| GSMUA_Achr4P20380_001 | Banana | cytosol | 34.92 | 65.67 |
| TraesCS2D01G421300.1 | Wheat | cytosol | 57.14 | 45.28 |
| EES11414 | Sorghum | cytosol | 54.76 | 43.4 |
| Zm00001d002339_P001 | Maize | plasma membrane | 54.76 | 43.4 |
| Zm00001d026286_P001 | Maize | cytosol | 54.76 | 43.4 |
| TraesCS6D01G203900.1 | Wheat | cytosol | 52.38 | 40.99 |
Protein Annotations
| Gene3D:2.40.50.1000 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:NA-bd_OB-fold | PFAM:PD001295 |
| PFAM:PF00366 | ScanProsite:PS00056 | PANTHER:PTHR10744 | PANTHER:PTHR10744:SF18 | InterPro:Ribosomal_S17/S11 | InterPro:Ribosomal_S17_CS |
| SUPFAM:SSF50249 | EnsemblPlantsGene:TraesCS4D01G276300 | EnsemblPlants:TraesCS4D01G276300.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4D:-:447340693..447344741
Molecular Weight (calculated)
13856.0 Da
IEP (calculated)
11.365
GRAVY (calculated)
-0.113
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MTESRARKLP AVFVARVATF AIAFRVNRGA GAPSPRRATG MYIDRKCPFT GTVLSEAELM LEHATMYEKR HPSISPHISP FFRVKEGDHV IIGQCRPLSK
101: TVRFNLLKVI PPVSTGGTGK KTFTAA
101: TVRFNLLKVI PPVSTGGTGK KTFTAA
001: MAEQTEKAFL KQPKVFLSSK KSGKGKRPGK GGNRFWKNIG LGFKTPREAI DGAYVDKKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRD YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHIIIGQCR PLSKTVRFNV LKVIPAGSSS SFGKKAFTGM
101: YEKRHSNIPA HVSPCFRVKE GDHIIIGQCR PLSKTVRFNV LKVIPAGSSS SFGKKAFTGM
Arabidopsis Description
RPS11A40S ribosomal protein S11-1 [Source:UniProtKB/Swiss-Prot;Acc:P16181]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.