Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P13340_001 | Banana | cytosol | 87.27 | 71.64 |
| GSMUA_Achr4P20380_001 | Banana | cytosol | 87.27 | 71.64 |
| TraesCS4D01G276300.1 | Wheat | mitochondrion, plastid | 80.0 | 34.92 |
| Os04t0613600-00 | Rice | cytosol | 92.73 | 31.68 |
| Os07t0565000-01 | Rice | cytosol | 92.73 | 31.68 |
| Os07t0565100-00 | Rice | nucleus | 92.73 | 31.68 |
| EES11414 | Sorghum | cytosol | 89.09 | 30.82 |
| Zm00001d002339_P001 | Maize | plasma membrane | 89.09 | 30.82 |
| Zm00001d026286_P001 | Maize | cytosol | 89.09 | 30.82 |
| Os04t0502300-01 | Rice | cytosol, plasma membrane, plastid | 85.45 | 29.38 |
| Os04t0613500-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:17.1.3.1.12 | Gene3D:2.40.50.1000 | ProteinID:BAF23157.1 | ProteinID:BAT04314.1 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0022627 | InterPro:NA-bd_OB-fold | EnsemblPlantsGene:Os08g0207000 | EnsemblPlants:Os08t0207000-01 | PFAM:PD001295 |
| PFAM:PF00366 | ScanProsite:PS00056 | PANTHER:PTHR10744 | PANTHER:PTHR10744:SF18 | UniProt:Q0J7A8 | InterPro:Ribosomal_S17/S11 |
| InterPro:Ribosomal_S17_CS | SUPFAM:SSF50249 | UniParc:UPI0000DD9421 | : | : | : |
Description
Similar to 40S ribosomal protein S11. (Os08t0207000-01)
Coordinates
chr8:-:6244128..6245111
Molecular Weight (calculated)
5825.2 Da
IEP (calculated)
10.951
GRAVY (calculated)
0.095
Length
55 amino acids
Sequence
(BLAST)
(BLAST)
1: HSNIPAHISP CFRVKEGDHV IIGQCRPLSK TVRFNVIKVI PAGSTGGGKK AFIAA
001: MAEQTEKAFL KQPKVFLSSK ISGKGKRPGK GGNRFWKNIG LGFKTPREAI DGAYIDSKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRN YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FGKKAFTGV
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FGKKAFTGV
Arabidopsis Description
RPS11CRPS11-BETA [Source:UniProtKB/TrEMBL;Acc:A0A178UPD3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.