Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G083800.1 | Wheat | mitochondrion | 89.47 | 87.93 |
| TraesCS6A01G151900.1 | Wheat | mitochondrion | 89.47 | 87.93 |
| TraesCS5A01G122800.1 | Wheat | mitochondrion | 88.6 | 87.07 |
| TraesCS6A01G183500.1 | Wheat | mitochondrion | 86.84 | 86.09 |
| TraesCS6A01G201200.1 | Wheat | cytosol | 86.84 | 85.34 |
| TraesCS1A01G271600.1 | Wheat | cytosol | 86.84 | 66.0 |
| TraesCS3A01G149600.1 | Wheat | cytosol | 67.54 | 64.17 |
| TraesCS2D01G553900.1 | Wheat | cytosol | 52.63 | 59.41 |
| TraesCS3B01G333100.1 | Wheat | cytosol, golgi | 53.51 | 17.13 |
| TraesCS4B01G144900.1 | Wheat | cytosol, extracellular, golgi, unclear | 49.12 | 15.22 |
| TraesCS2B01G200900.1 | Wheat | cytosol | 42.98 | 13.61 |
| TraesCS2B01G526700.1 | Wheat | cytosol, golgi | 20.18 | 6.61 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G104000.1 | EnsemblPlantsGene:TraesCS5B01G104000 | InterPro:RGP_fam | KEGG:00520+5.4.99.30 | PANTHER:PTHR31682 | PANTHER:PTHR31682:SF8 |
| PFAM:PF03214 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:139002625..139002969
Molecular Weight (calculated)
12739.2 Da
IEP (calculated)
6.931
GRAVY (calculated)
-0.811
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MCAGDMRPPW ARSQDGAALH LEQQGQQPNR EPEEGVQGHL LAGGHHPLLP DRKTDKECDT VQKCYISLSQ QVKEKLSKID PYFIKLADAM VTWIEARDML
101: NSKEADANGK LKGK
101: NSKEADANGK LKGK
001: MVEPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL SLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEEIIPFF
301: QNAKLSKEAV TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPAASGKA
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL SLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEEIIPFF
301: QNAKLSKEAV TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPAASGKA
Arabidopsis Description
RGP2RGP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UG61]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.