Factsheet for TraesCS2B01G200900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022085_P001	Maize	cytosol, plastid	92.78	92.52
EER97509	Sorghum	cytosol	92.78	92.52
HORVU2Hr1G033100.1	Barley	cytosol, golgi, mitochondrion	97.78	91.91
GSMUA_AchrUn_...	Banana	cytosol	66.11	91.89
Os07t0604800-01	Rice	cytosol, plasma membrane	92.22	90.71
GSMUA_Achr4P23520_001	Banana	cytosol	67.22	89.63
GSMUA_Achr6P35020_001	Banana	cytosol	66.11	88.81
GSMUA_Achr10P...	Banana	cytosol	80.0	86.75
KRH75101	Soybean	endoplasmic reticulum	88.61	86.68
TraesCS4B01G144900.1	Wheat	cytosol, extracellular, golgi, unclear	88.33	86.41
KRH70960	Soybean	endoplasmic reticulum	87.22	85.33
TraesCS3B01G333100.1	Wheat	cytosol, golgi	83.33	84.27
TraesCS2D01G181700.1	Wheat	golgi	99.72	83.29
TraesCS2A01G174400.1	Wheat	golgi	99.17	83.22
Zm00001d006820_P001	Maize	cytosol	84.72	83.11
TraesCS2B01G526700.1	Wheat	cytosol, golgi	43.06	44.54
TraesCS5B01G104000.1	Wheat	cytosol	13.61	42.98

Protein Annotations

EnsemblPlants:TraesCS2B01G200900.1	EnsemblPlantsGene:TraesCS2B01G200900	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0009987
GO:GO:0016866	GO:GO:0071669	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	InterPro:RGP	InterPro:RGP_fam
KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	PFAM:PF03214	PIRSF:PIRSF016429	SUPFAM:SSF53448
MapMan:3.13.7.3	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:180420893..180423787

Molecular Weight (calculated)

40906.2 Da

IEP (calculated)

6.995

GRAVY (calculated)

-0.258

Length

360 amino acids

Sequence
(BLAST)

001: MATPTTPLLK DELDIVIPTI RNLDFLEMWR PFFQPYHLII VQDGDPSKVI KVPEGFDYEL YNRNDVNRIL GPKASCISFK DSACRCFGYM VSKKKYIYTI
101: DDDCFVAKDP SGKDINALEQ HIKNLLSPST PFFFNTLYDP YREGADFVRG YPFSLREGAP TAVSHGLWLN IPDYDAPTQL VKPRERNNRY VDAVLTIPKG
201: TLFPMCGMNL AFDRELIGPA MYFGLMGDGQ PIGRYDDMWA GWCTKVITDH LSLGIKTGLP YIWHSKASNP FVNLKKEYNG IFWQEELIPF FQSVTLSKEA
301: TTVQKCYLEL AKQVRAKLGK VDGYFNKLAD AMVTWIEAWD ELNPPKGAIT TTNGPALKSK

Best Arabidopsis Sequence Match ( AT5G15650.1 )
(BLAST)

001: MVEPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL SLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEEIIPFF
301: QNAKLSKEAV TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPAASGKA

Arabidopsis Description

RGP2RGP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UG61]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.