Factsheet for TraesCS2A01G174400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G200900.1	Wheat	cytosol	83.22	99.17
TraesCS2D01G181700.1	Wheat	golgi	97.44	96.98
HORVU2Hr1G033100.1	Barley	cytosol, golgi, mitochondrion	86.01	96.34
Zm00001d022085_P001	Maize	cytosol, plastid	77.39	91.97
EER97509	Sorghum	cytosol	77.39	91.97
GSMUA_AchrUn_...	Banana	cytosol	55.48	91.89
Os07t0604800-01	Rice	cytosol, plasma membrane	77.16	90.44
GSMUA_Achr4P23520_001	Banana	cytosol	56.41	89.63
GSMUA_Achr6P35020_001	Banana	cytosol	55.48	88.81
GSMUA_Achr10P...	Banana	cytosol	66.9	86.45
KRH75101	Soybean	endoplasmic reticulum	74.13	86.41
TraesCS4A01G166900.1	Wheat	cytosol	73.66	85.87
KRH70960	Soybean	endoplasmic reticulum	72.96	85.05
TraesCS3A01G303200.1	Wheat	cytosol, extracellular, golgi	69.46	83.24
Zm00001d006820_P001	Maize	cytosol	70.63	82.56
TraesCS3A01G149600.1	Wheat	cytosol	14.92	53.33
TraesCS1A01G271600.1	Wheat	cytosol	17.48	50.0
TraesCS2A01G498600.1	Wheat	cytosol, unclear	35.9	44.25
TraesCS6A01G151900.1	Wheat	mitochondrion	11.42	42.24
TraesCS5A01G083800.1	Wheat	mitochondrion	11.19	41.38
TraesCS6A01G183500.1	Wheat	mitochondrion	10.96	40.87
TraesCS5A01G122800.1	Wheat	mitochondrion	10.96	40.52
TraesCS6A01G201200.1	Wheat	cytosol	10.96	40.52

Protein Annotations

EnsemblPlants:TraesCS2A01G174400.1	EnsemblPlantsGene:TraesCS2A01G174400	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	PFAM:PF03214
SEG:seg	SUPFAM:SSF53448	MapMan:3.13.7.3	:	:	:

Description

No Description!

Coordinates

chr2A:-:133343654..133346585

Molecular Weight (calculated)

48337.5 Da

IEP (calculated)

9.477

GRAVY (calculated)

-0.302

Length

429 amino acids

Sequence
(BLAST)

001: MTSKGEKAKR SSPHRPRPVH SVRPSRPGPA LNPRPASSIL IYPVRFPHLS APRPTTACPS PARLLRLAAM AAPTTPLLKD KLDIVIPTIR NLDFLEMWRP
101: FFQPYHLIIV QDGDPAKVIK VPEGFDYELY NRNDVNRILG PKASCISFKD SACRCFGYMV SKKKYIYTID DDCFVAKDPS GKDINALEQH IKNLLSPSTP
201: FFFNTLYDPY REGADFVRGY PFSLREGAPT AVSHGLWLNI PDYDAPTQLV KPRERNNRYV DAVLTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP
301: IGRYDDMWAG WCTKVITDHL SLGIKTGLPY IWHSKASNPF VNLKKEYNGI FWQEELIPFF QSVTLSKEAT TVQKCYLELA KQVRAKLGKV DGYFNKLADA
401: MVTWIEAWDE LNPPKGAITT TNGPALKSK

Best Arabidopsis Sequence Match ( AT3G08900.1 )
(BLAST)

001: MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSKVINIPVG FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAKDPTGKEI NALEQHIKNL LSPSTPHFFN TLYDPYRDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE KNSRYVDAVM
201: TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHMGWGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE EAIPFFQSVT
301: LPKECTSVQQ CYLELAKLVR EKLGKVDPYF ITLATGMVTW IEAWEELNSA EGTEAEAPKG KN

Arabidopsis Description

RGP3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.