Factsheet for Zm00001d006820_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022085_P001	Maize	cytosol, plastid	87.47	88.92
EER97509	Sorghum	cytosol	87.19	88.64
TraesCS2B01G200900.1	Wheat	cytosol	83.11	84.72
Os07t0604800-01	Rice	cytosol, plasma membrane	83.65	83.88
GSMUA_AchrUn_...	Banana	cytosol	58.58	83.01
GSMUA_Achr6P35020_001	Banana	cytosol	59.13	80.97
GSMUA_Achr10P...	Banana	cytosol	72.75	80.42
HORVU2Hr1G033100.1	Barley	cytosol, golgi, mitochondrion	82.83	79.37
GSMUA_Achr4P23520_001	Banana	cytosol	58.31	79.26
KRH75101	Soybean	endoplasmic reticulum	79.29	79.08
Zm00001d033174_P001	Maize	plasma membrane	78.2	78.85
KRH70960	Soybean	endoplasmic reticulum	79.02	78.8
Zm00001d013751_P005	Maize	plastid	77.66	78.3
TraesCS2A01G174400.1	Wheat	golgi	82.56	70.63
TraesCS2D01G181700.1	Wheat	golgi	82.83	70.53
Zm00001d042881_P001	Maize	extracellular	8.72	47.06
Zm00001d014000_P001	Maize	plastid	34.6	43.05
Zm00001d012683_P001	Maize	cytosol, nucleus, peroxisome	38.15	41.67
Zm00001d001979_P002	Maize	extracellular, vacuole	41.14	35.7

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	UniProt:A0A1D6F125	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	ProteinID:ONM25173.1	PFAM:PF03214	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13
InterPro:RGP_fam	SUPFAM:SSF53448	UniParc:UPI000843C57A	EnsemblPlantsGene:Zm00001d006820	EnsemblPlants:Zm00001d006820_P001	EnsemblPlants:Zm00001d006820_T001

Description

UDP-arabinopyranose mutase 3

Coordinates

chr2:-:217255984..217259555

Molecular Weight (calculated)

41819.2 Da

IEP (calculated)

6.172

GRAVY (calculated)

-0.222

Length

367 amino acids

Sequence
(BLAST)

001: MASAAHAPTP VLKDELDIVI PTIRNLDFLE MWRSFFHPYH LIIVQDGDPS KTIRVPEGFD YELYNRNDIN RILGPKAYCI SFKDSACRCF GYMVSKKKYI
101: YTIDDDCFVA KDPSGNDINA LEQHIKNLPS PSTPFFFNTL YDPYRVGTDF VRGYPFSLRE DVPTAVSHGL WLNIPDYDAP TQLVKPLERN TRYVDAILTI
201: PKGALFPMCG MNLAFDRELI GPAMYFGLMG DGQPIGRYDD MWAGWCTKAS DYYQYMLIDC TLLGDFSLVL VHKASNPFVN LKKEYNGIFW QEELIPFFQS
301: VSLPKDATTV QKCYLELAKQ VRARLGKVDG YFNKLADSMV TWIEAWDELN PAKGGVRVPT ANGPHKK

Best Arabidopsis Sequence Match ( AT3G08900.1 )
(BLAST)

001: MAQLYSSVKP TPMLKDELDI VIPTIRNLDF LEMWRPFFEQ YHLIIVQDGD PSKVINIPVG FDYELYNRND INRILGPKAS CISFKDSACR CFGYMVSKKK
101: YIYTIDDDCF VAKDPTGKEI NALEQHIKNL LSPSTPHFFN TLYDPYRDGA DFVRGYPFSM REGAITAVSH GLWLNIPDYD APTQLVKPLE KNSRYVDAVM
201: TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL MGDGQPIGRY DDMWAGWCVK VICDHMGWGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE EAIPFFQSVT
301: LPKECTSVQQ CYLELAKLVR EKLGKVDPYF ITLATGMVTW IEAWEELNSA EGTEAEAPKG KN

Arabidopsis Description

RGP3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.