Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P32910_001 | Banana | cytosol | 51.47 | 12.96 |
| Zm00001d012683_P001 | Maize | cytosol, nucleus, peroxisome | 51.47 | 10.42 |
| Zm00001d022085_P001 | Maize | cytosol, plastid | 51.47 | 9.7 |
| Zm00001d033174_P001 | Maize | plasma membrane | 50.0 | 9.34 |
| KRH70960 | Soybean | endoplasmic reticulum | 50.0 | 9.24 |
| KRH75101 | Soybean | endoplasmic reticulum | 50.0 | 9.24 |
| Zm00001d013751_P005 | Maize | plastid | 48.53 | 9.07 |
| Zm00001d006820_P001 | Maize | cytosol | 47.06 | 8.72 |
| Zm00001d001979_P002 | Maize | extracellular, vacuole | 29.41 | 4.73 |
| Zm00001d014000_P001 | Maize | plastid | 14.71 | 3.39 |
Protein Annotations
| EnsemblPlants:Zm00001d042881_P001 | EnsemblPlants:Zm00001d042881_T001 | EnsemblPlantsGene:Zm00001d042881 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016866 | GO:GO:0030244 | InterPro:RGP_fam | KEGG:00520+5.4.99.30 | PFAM:PF03214 |
| ProteinID:ONM36452.1 | TMHMM:TMhelix | UniParc:UPI000844A1A1 | UniProt:A0A1D6N786 | MapMan:35.2 | : |
Description
Probable UDP-arabinopyranose mutase 5
Coordinates
chr3:+:182675814..182676400
Molecular Weight (calculated)
7878.7 Da
IEP (calculated)
9.368
GRAVY (calculated)
0.134
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: MCGMNLAFDR ELIGPAMYFG LWVMASLLDL FCSHLTGLRK LSSRNPNQRH KRLASLQLWY ITFVWDGS
001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA
Arabidopsis Description
RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.