Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 90.37 | 94.21 |
| GSMUA_Achr4P23520_001 | Banana | cytosol | 92.59 | 92.59 |
| GSMUA_Achr6P35020_001 | Banana | cytosol | 91.48 | 92.16 |
| GSMUA_Achr2P13630_001 | Banana | cytosol | 41.48 | 80.58 |
| GSMUA_Achr3P25300_001 | Banana | cytosol | 85.56 | 80.21 |
| GSMUA_Achr10P... | Banana | cytosol | 89.26 | 72.59 |
| GSMUA_Achr4P14450_001 | Banana | cytosol | 82.96 | 68.09 |
| KRH75101 | Soybean | endoplasmic reticulum | 88.52 | 64.95 |
| KRH70960 | Soybean | endoplasmic reticulum | 87.78 | 64.4 |
| GSMUA_Achr8P28120_001 | Banana | cytosol | 86.67 | 62.9 |
| GSMUA_Achr7P00470_001 | Banana | cytosol | 78.52 | 61.63 |
| Zm00001d042881_P001 | Maize | extracellular | 12.96 | 51.47 |
| Zm00001d014000_P001 | Maize | plastid | 36.3 | 33.22 |
| GSMUA_Achr2P13620_001 | Banana | cytosol | 17.41 | 22.17 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P32910_001 | EnsemblPlants:GSMUA_Achr4T32910_001 | EnsemblPlantsGene:GSMUA_Achr4G32910_001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016866 | GO:GO:0030244 |
| InterPro:RGP_fam | KEGG:00520+5.4.99.30 | PANTHER:PTHR31682 | PANTHER:PTHR31682:SF13 | PFAM:PF03214 | UniParc:UPI000296634F |
| UniProt:M0SU53 | MapMan:3.13.7.3 | : | : | : | : |
Description
Alpha-1,4-glucan-protein synthase [UDP-forming] 2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G32910_001]
Coordinates
chr4:+:29554549..29557253
Molecular Weight (calculated)
30642.9 Da
IEP (calculated)
7.004
GRAVY (calculated)
-0.309
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSKKKYIYT IDDDCFVAKD PSGKEINALE QHIKNLLTPS TPHFFNTLYD PYRDGADFVR GYPFSLREGA PTAVSHGLWL NIPDYDAPTQ LVKPLERNQR
101: YVDAVLTIPK GTLFPMCGMN LAFDRELIGP AMYFGLMGDG QPIGRYDDMW AGWCTKVICD HLRLGVKTGL PYIWHSKASN PFVNLKKEYN GIFWQEEVIP
201: FFQSAVLSKD CTTIQKCYIE LSKQVREKLG KIDPYFNKLA DAMVTWIEAW DELNPPKEAA GVPNGTVKGK
101: YVDAVLTIPK GTLFPMCGMN LAFDRELIGP AMYFGLMGDG QPIGRYDDMW AGWCTKVICD HLRLGVKTGL PYIWHSKASN PFVNLKKEYN GIFWQEEVIP
201: FFQSAVLSKD CTTIQKCYIE LSKQVREKLG KIDPYFNKLA DAMVTWIEAW DELNPPKEAA GVPNGTVKGK
001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA
Arabidopsis Description
RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.