Factsheet for GSMUA_Achr3P25300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
golgi 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	79.51	88.42
GSMUA_Achr6P35020_001	Banana	cytosol	81.25	87.31
GSMUA_Achr4P23520_001	Banana	cytosol	80.21	85.56
GSMUA_Achr4P32910_001	Banana	cytosol	80.21	85.56
GSMUA_Achr2P13630_001	Banana	cytosol	36.46	75.54
GSMUA_Achr4P14450_001	Banana	cytosol	79.17	69.3
GSMUA_Achr10P...	Banana	cytosol	79.17	68.67
Solyc03g114860.2.1	Tomato	cytosol, extracellular, unclear	82.29	67.52
GSMUA_Achr8P28120_001	Banana	cytosol	86.46	66.94
PGSC0003DMT400063316	Potato	cytosol	83.68	66.03
KRH54738	Soybean	cytosol, endoplasmic reticulum	82.99	66.02
VIT_17s0000g05030.t01	Wine grape	cytosol	81.94	65.92
KRH63176	Soybean	endoplasmic reticulum	81.94	64.84
GSMUA_Achr7P00470_001	Banana	cytosol	72.92	61.05
GSMUA_Achr2P13620_001	Banana	cytosol	15.97	21.7

Protein Annotations

EnsemblPlants:GSMUA_Achr3P25300_001	EnsemblPlants:GSMUA_Achr3T25300_001	EnsemblPlantsGene:GSMUA_Achr3G25300_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	PFAM:PF03214	UniParc:UPI0002951F26
UniProt:M0SHP6	MapMan:3.13.7.3	:	:	:	:

Description

Alpha-1,4-glucan-protein synthase [UDP-forming] 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G25300_001]

Coordinates

chr3:-:25529517..25532260

Molecular Weight (calculated)

32853.0 Da

IEP (calculated)

7.384

GRAVY (calculated)

-0.028

Length

288 amino acids

Sequence
(BLAST)

001: MISKKKYIFT IDDDCFVAKD PSGKEINALE QHIKNLLSPS TPFFFNTLYD PYHEGADFVR GYPFSLREGV PTAVSHGLWL NIPDYDAPTQ LVKPLERNTR
101: YVDAVLTVPK GTLFPMCGMN LAFNREVIGP AMYFGLMGDG QPIGRYDDMW AGWCMKVICD HLGLGVKTGL PYIWHSKASN PFVNLKKEYK GIYWQEELIP
201: FFQTVTLPKE CTTVQKCYLE LSKQVKAKLG KVDDYFNKLT DAMVTWIEAW DELNPSLFSN LAVVKCLVFL VNAMFSYIKI SFTTIKLL

Best Arabidopsis Sequence Match ( AT5G16510.1 )
(BLAST)

001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA

Arabidopsis Description

RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.