Factsheet for GSMUA_Achr4P14450_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
golgi 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	67.48	85.71
GSMUA_Achr6P35020_001	Banana	cytosol	68.09	83.58
GSMUA_Achr4P32910_001	Banana	cytosol	68.09	82.96
GSMUA_Achr10P...	Banana	cytosol	83.28	82.53
GSMUA_Achr4P23520_001	Banana	cytosol	67.17	81.85
KRH54738	Soybean	cytosol, endoplasmic reticulum	87.84	79.83
GSMUA_Achr3P25300_001	Banana	cytosol	69.3	79.17
VIT_17s0000g05030.t01	Wine grape	cytosol	85.71	78.77
KRH63176	Soybean	endoplasmic reticulum	86.93	78.57
Solyc03g114860.2.1	Tomato	cytosol, extracellular, unclear	83.59	78.35
GSMUA_Achr8P28120_001	Banana	cytosol	86.93	76.88
PGSC0003DMT400063316	Potato	cytosol	85.11	76.71
GSMUA_Achr7P00470_001	Banana	cytosol	77.81	74.42
GSMUA_Achr2P13630_001	Banana	cytosol	30.7	72.66
GSMUA_Achr2P13620_001	Banana	cytosol	28.57	44.34

Protein Annotations

EnsemblPlants:GSMUA_Achr4P14450_001	EnsemblPlants:GSMUA_Achr4T14450_001	EnsemblPlantsGene:GSMUA_Achr4G14450_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
GO:GO:0071669	InterPro:RGP	InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13
PFAM:PF03214	PIRSF:PIRSF016429	UniParc:UPI000295A4ED	UniProt:M0SNW0	MapMan:3.13.7.3	:

Description

Alpha-1,4-glucan-protein synthase [UDP-forming] [Source:GMGC_GENE;Acc:GSMUA_Achr4G14450_001]

Coordinates

chr4:+:10797903..10800900

Molecular Weight (calculated)

37628.0 Da

IEP (calculated)

6.310

GRAVY (calculated)

-0.313

Length

329 amino acids

Sequence
(BLAST)

001: MWRPFFQPYH LIIVQDGDPR KTITVPDGFD YELYNRNDIN RILGPKAACI SFNDSTCRCF GFLVSKKKYV FTVDDDCFVA KDPSGKEINA SEQHIKNLLS
101: PSTPFFFNTL YDPYREGADF VRGYPFSLRE GVPTAVSHGL WLNIPDYDAP TQLVKPHERN ARQEYVDAVI TVPKGALFPM CGMNLAFNRE LIGPAMYFGL
201: MGDGQPIRRY DDMWAGWCVK VICDHLGLGV KTGLPYIWHS KASNPLVNLK KEYHGIHWQE EVIPFFQAVS IPKKCTTPQE CYIELSKQVK EKLGKVDEYF
301: NKLADAMVTW IEAWDELNPS EKLSNISAE

Best Arabidopsis Sequence Match ( AT3G02230.1 )
(BLAST)

001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA

Arabidopsis Description

RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.