Factsheet for GSMUA_Achr8P28120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g114860.2.1	Tomato	cytosol, extracellular, unclear	83.87	88.89
GSMUA_AchrUn_...	Banana	cytosol	61.83	88.8
VIT_17s0000g05030.t01	Wine grape	cytosol	85.22	88.55
PGSC0003DMT400063316	Potato	cytosol	85.48	87.12
GSMUA_Achr10P...	Banana	cytosol	77.69	87.05
GSMUA_Achr4P23520_001	Banana	cytosol	63.17	87.04
GSMUA_Achr4P14450_001	Banana	cytosol	76.88	86.93
KRH54738	Soybean	cytosol, endoplasmic reticulum	84.41	86.74
GSMUA_Achr4P32910_001	Banana	cytosol	62.9	86.67
GSMUA_Achr6P35020_001	Banana	cytosol	62.37	86.57
GSMUA_Achr3P25300_001	Banana	cytosol	66.94	86.46
KRH63176	Soybean	endoplasmic reticulum	83.06	84.89
GSMUA_Achr7P00470_001	Banana	cytosol	76.08	82.27
GSMUA_Achr2P13630_001	Banana	cytosol	29.3	78.42
GSMUA_Achr2P13620_001	Banana	cytosol	32.8	57.55

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244	GO:GO:0071669
EnsemblPlantsGene:GSMUA_Achr8G28120_001	EnsemblPlants:GSMUA_Achr8P28120_001	EnsemblPlants:GSMUA_Achr8T28120_001	InterPro:IPR029044	UniProt:M0TUB5	InterPro:Nucleotide-diphossugar_trans
PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	InterPro:RGP	InterPro:RGP_fam
SUPFAM:SSF53448	UniParc:UPI000296468E	SEG:seg	:	:	:

Description

Alpha-1,4-glucan-protein synthase [UDP-forming] 2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G28120_001]

Coordinates

chr8:-:30998469..31001411

Molecular Weight (calculated)

41989.6 Da

IEP (calculated)

6.974

GRAVY (calculated)

-0.182

Length

372 amino acids

Sequence
(BLAST)

001: MVSGSSLTST STPSISLLKD ELDIVIPTIR NLDFLEMWRP FFQPYHLIIV QDGDPSKTIR VPDGFDYKLY NRNDINRILG PKAACISFKD SACRCFGYLI
101: SKKKYIFTID DDCFVAKDPS GKEINALEQH IKNLLSPSTP FFFNTLYDPY REGADFVRGY PFSLREGVQT AVSHGLWLNI PDYDAPTQLV KPLERNKRYV
201: DAVLTVPMGT LFPMCGMNLA FNRELIGPAM YFGLMGDGQP IGRYDDMWAG WCMKVICDHL GLGVKTGLPY IWHSKASNPF VNLKKEYKGI YWQEELIPFF
301: QTAVLPKECT TVQTCYLELS KLVKAKLGKV DDYFNKLADA MVTWIEAWDE LNPSENPGSS AAVKPNGAAK GK

Best Arabidopsis Sequence Match ( AT3G02230.1 )
(BLAST)

001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA

Arabidopsis Description

RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.