Factsheet for GSMUA_Achr6P35020_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	90.3	93.44
GSMUA_Achr4P32910_001	Banana	cytosol	92.16	91.48
GSMUA_Achr4P23520_001	Banana	cytosol	92.16	91.48
GSMUA_Achr3P25300_001	Banana	cytosol	87.31	81.25
GSMUA_Achr2P13630_001	Banana	cytosol	41.42	79.86
GSMUA_Achr10P...	Banana	cytosol	90.3	72.89
GSMUA_Achr4P14450_001	Banana	cytosol	83.58	68.09
EER97509	Sorghum	cytosol	89.18	66.2
TraesCS2B01G200900.1	Wheat	cytosol	88.81	66.11
KRH70960	Soybean	endoplasmic reticulum	90.3	65.76
Zm00001d022085_P001	Maize	cytosol, plastid	88.43	65.65
Os07t0604800-01	Rice	cytosol, plasma membrane	88.81	65.03
KRH75101	Soybean	endoplasmic reticulum	89.18	64.95
GSMUA_Achr8P28120_001	Banana	cytosol	86.57	62.37
HORVU2Hr1G033100.1	Barley	cytosol, golgi, mitochondrion	87.69	61.36
GSMUA_Achr7P00470_001	Banana	cytosol	78.73	61.34
Zm00001d006820_P001	Maize	cytosol	80.97	59.13
TraesCS2A01G174400.1	Wheat	golgi	88.81	55.48
TraesCS2D01G181700.1	Wheat	golgi	88.81	55.22
GSMUA_Achr2P13620_001	Banana	cytosol	16.79	21.23

Protein Annotations

EnsemblPlants:GSMUA_Achr6P35020_001	EnsemblPlants:GSMUA_Achr6T35020_001	EnsemblPlantsGene:GSMUA_Achr6G35020_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF13	PFAM:PF03214	UniParc:UPI000294B4B9
UniProt:M0TCU5	MapMan:3.13.7.3	:	:	:	:

Description

Alpha-1,4-glucan-protein synthase [UDP-forming] 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G35020_001]

Coordinates

chr6:+:33381301..33384132

Molecular Weight (calculated)

30204.3 Da

IEP (calculated)

6.899

GRAVY (calculated)

-0.234

Length

268 amino acids

Sequence
(BLAST)

001: MVSKKKYIYT IDDDCFVAKD PSDKEINALE QHIKNLLSPS TPYFFNTLYD PYRVGADFVR GYPFSLREGA PTAVSHGLWL NIPDYDAPTQ LVKPRERNSR
101: YVDAVLTIPK GTLFPMCGMN LAFDRDLIGP AMYFGLMGDG QPIGRYDDMW AGWCTKVICD HLGLGVKTGL PYIWHSKASN PFVNLKKEYK GIFWQEELIP
201: FFQSVALPKD CTSVQKCYIE LSKQVREKLG KIDPYFTKLA DAMVTWIEAW DELNPSGAAA GVANGTAK

Best Arabidopsis Sequence Match ( AT3G02230.1 )
(BLAST)

001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA

Arabidopsis Description

RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.