Factsheet for GSMUA_Achr7P00470_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	62.21	82.63
Solyc03g019750.2.1	Tomato	cytosol	81.1	79.94
PGSC0003DMT400039494	Potato	cytosol	80.81	79.66
GSMUA_Achr10P...	Banana	cytosol	76.45	79.22
GSMUA_Achr6P35020_001	Banana	cytosol	61.34	78.73
GSMUA_Achr4P32910_001	Banana	cytosol	61.63	78.52
GSMUA_Achr4P23520_001	Banana	cytosol	61.34	78.15
GSMUA_Achr4P14450_001	Banana	cytosol	74.42	77.81
GSMUA_Achr8P28120_001	Banana	cytosol	82.27	76.08
GSMUA_Achr3P25300_001	Banana	cytosol	61.05	72.92
GSMUA_Achr2P13630_001	Banana	cytosol	27.33	67.63
GSMUA_Achr2P13620_001	Banana	cytosol	32.56	52.83
VIT_04s0023g00110.t01	Wine grape	cytosol	51.74	49.86
AT5G16510.2	Thale cress	cytosol	50.0	49.43
CDX69446	Canola	cytosol	50.0	49.43
Bra008616.1-P	Field mustard	cytosol	50.0	49.43
CDY55583	Canola	cytosol	49.71	49.14
EES11595	Sorghum	cytosol	45.93	45.4
CDX85502	Canola	cytosol	14.24	45.37
Bra023571.1-P	Field mustard	cytosol	13.66	44.34
Os04t0660400-01	Rice	cytosol, plasma membrane, plastid	44.48	44.09
CDX78695	Canola	cytosol	13.37	43.81
TraesCS2D01G498900.1	Wheat	cytosol, golgi, unclear	43.9	43.39
TraesCS2B01G526700.1	Wheat	cytosol, golgi	43.9	43.39
TraesCS2A01G498600.1	Wheat	cytosol, unclear	43.9	43.39
HORVU2Hr1G111070.2	Barley	cytosol	43.6	43.1
Bra006359.1-P	Field mustard	cytosol	13.08	42.86
CDY38107	Canola	cytosol	18.9	41.67
KRH40343	Soybean	cytosol, extracellular, plastid	49.71	40.05
KRH00886	Soybean	cytosol, peroxisome, plastid	49.13	39.58
Zm00001d001979_P002	Maize	extracellular, vacuole	46.22	37.59

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244	GO:GO:0071669
EnsemblPlantsGene:GSMUA_Achr7G00470_001	EnsemblPlants:GSMUA_Achr7P00470_001	EnsemblPlants:GSMUA_Achr7T00470_001	InterPro:IPR029044	UniProt:M0TDI7	InterPro:Nucleotide-diphossugar_trans
PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF15	InterPro:RGP	InterPro:RGP_fam
SUPFAM:SSF53448	UniParc:UPI0002951F5A	:	:	:	:

Description

Alpha-1,4-glucan-protein synthase [UDP-forming] 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G00470_001]

Coordinates

chr7:-:383910..385361

Molecular Weight (calculated)

39276.2 Da

IEP (calculated)

4.982

GRAVY (calculated)

-0.142

Length

344 amino acids

Sequence
(BLAST)

001: MALMKDEVDI VIPTIRTLDF LESWRPFFQP YHLIIVQDGD PSKTIKVPEG FDYDLYNRDD INRILGPKAS CISYKESACR CFGFLISKKK YIYTIDDDCF
101: VAKDPSGKEI DAVEQHIQNL ITPSTPFFFN TLYDPYREGA DFVRGYPFSM RSGVPTAVSH GLWLNIPDYD APTQLVKPRE RSTRYVDAVI TIPKGTLYPM
201: CGMNLAFDRE LIGAAMYFGL LGDGQPFKRY DDMLAGWLSK VVCDHLGLGV KTGLPYIWHS KASDPFVNLK KEFNGLFWQE ELIPFFQSVV LPKECTTAQQ
301: CYLELAKLVK ENLASIDPYF IRLADAMVTW IEAWDEFNPP KPAA

Best Arabidopsis Sequence Match ( AT3G02230.1 )
(BLAST)

001: MVEPANTVGI PVNHIPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKTIA VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSTP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QSAKLTKEAV TVQQCYMELS KLVKEKLSPI DPYFDKLADA MVTWIEAWDE LNPPTKA

Arabidopsis Description

RGP1RGP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VK37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.