Factsheet for Bra008616.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69446	Canola	cytosol	99.71	99.71
AT5G16510.2	Thale cress	cytosol	92.82	92.82
Bra023571.1-P	Field mustard	cytosol	27.59	90.57
Bra006359.1-P	Field mustard	cytosol	26.44	87.62
PGSC0003DMT400059506	Potato	cytosol	69.25	69.25
Solyc04g051200.1.1	Tomato	cytosol, unclear	68.39	68.39
VIT_04s0023g00110.t01	Wine grape	cytosol	66.95	65.27
Os04t0660400-01	Rice	cytosol, plasma membrane, plastid	61.49	61.67
TraesCS2B01G526700.1	Wheat	cytosol, golgi	61.21	61.21
TraesCS2D01G498900.1	Wheat	cytosol, golgi, unclear	61.21	61.21
EES11595	Sorghum	cytosol	61.21	61.21
HORVU2Hr1G111070.2	Barley	cytosol	61.21	61.21
TraesCS2A01G498600.1	Wheat	cytosol, unclear	60.92	60.92
KRH00886	Soybean	cytosol, peroxisome, plastid	72.13	58.78
KRH40343	Soybean	cytosol, extracellular, plastid	71.55	58.31
GSMUA_Achr7P00470_001	Banana	cytosol	49.43	50.0
Zm00001d001979_P002	Maize	extracellular, vacuole	60.34	49.65
Bra001037.1-P	Field mustard	cytosol	49.71	48.46
Bra039165.1-P	Field mustard	cytosol, extracellular, peroxisome	49.14	47.9
Bra021473.1-P	Field mustard	cytosol	49.14	47.9
Bra008683.1-P	Field mustard	cytosol	48.85	47.62
Bra006315.1-P	Field mustard	cytosol	48.85	46.83
Bra001338.1-P	Field mustard	cytosol	48.85	46.7
Bra000628.1-P	Field mustard	cytosol	46.84	45.4
Bra029728.1-P	Field mustard	cytosol	48.56	44.71
Bra023530.1-P	Field mustard	cytosol, extracellular, peroxisome	42.82	43.7

Protein Annotations

EnsemblPlants:Bra008616.1	EnsemblPlants:Bra008616.1-P	EnsemblPlantsGene:Bra008616	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016866	GO:GO:0030244
GO:GO:0071669	InterPro:RGP	InterPro:RGP_fam	KEGG:00520+5.4.99.30	PANTHER:PTHR31682	PANTHER:PTHR31682:SF4
PFAM:PF03214	PIRSF:PIRSF016429	UniParc:UPI0002544A4E	UniProt:M4CWL9	MapMan:3.13.7.3	:

Description

AT5G16510 (E=2e-194) | reversibly glycosylated polypeptide, putative

Coordinates

chrA10:-:13105896..13106942

Molecular Weight (calculated)

38389.9 Da

IEP (calculated)

4.677

GRAVY (calculated)

-0.058

Length

348 amino acids

Sequence
(BLAST)

001: MSSSEINKNE VDIVIGALNA DLTQFLNSWR PFFSGFHLII VKDPELKDDL NIPEGFDVDV YSKPDIEKVV GAANAAMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GVLVDAVSQH VSNLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEQRNTSYV DAVMTVPLKA
201: MLPISGINIA FNRELVGPAL VPALRIAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFEALKLPE
301: SAVNVEDCVV ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSG

Best Arabidopsis Sequence Match ( AT5G16510.1 )
(BLAST)

001: MSLAEINKNE VDIVIGALNA DLTQFLTSWR PFFSGFHLIV VKDPELKEEL NIPEGFDVDV YSKTDMEKVV GASNSTMFSG YSCRYFGYLV SKKKYIVSID
101: DDCVPAKDPK GFLVDAVTQH VINLENPATP LFFNTLYDPY CEGADFVRGY PFSLRSGVPC AASCGLWLNL ADLDAPTQAL KTEKRNTAYV DAVMTVPAKA
201: MLPISGINIA FNRELVGPAL VPALRLAGEG KVRWETLEDV WCGMCLKHIS DHLGYGVKTG LPYVWRNERG DAVESLRKKW EGMKLMEKSV PFFDSLKLPE
301: TALKVEDCVI ELAKAVKEQL GSDDPAFTQA ADAMVKWVQL WNSVNSSA

Arabidopsis Description

RGP5Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q2T5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.