Factsheet for Bra008683.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69510	Canola	cytosol	93.56	99.7
CDY26446	Canola	cytosol	93.28	99.4
Bra006315.1-P	Field mustard	cytosol	97.76	96.14
AT5G15650.1	Thale cress	cytosol	96.36	95.56
Bra023530.1-P	Field mustard	cytosol, extracellular, peroxisome	91.04	95.31
Bra021473.1-P	Field mustard	cytosol	94.12	94.12
Bra001037.1-P	Field mustard	cytosol	93.56	93.56
Bra039165.1-P	Field mustard	cytosol, extracellular, peroxisome	93.56	93.56
Bra001338.1-P	Field mustard	cytosol	82.35	80.77
Bra029728.1-P	Field mustard	cytosol	82.07	77.51
Bra000628.1-P	Field mustard	cytosol	75.63	75.21
Bra008616.1-P	Field mustard	cytosol	47.62	48.85
Bra023571.1-P	Field mustard	cytosol	12.61	42.45
Bra006359.1-P	Field mustard	cytosol	12.32	41.9

Protein Annotations

KEGG:00520+5.4.99.30	MapMan:3.13.7.3	EnsemblPlantsGene:Bra008683	EnsemblPlants:Bra008683.1	EnsemblPlants:Bra008683.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016866	GO:GO:0030244	GO:GO:0071669	InterPro:IPR029044	UniProt:M4CWT6	InterPro:Nucleotide-diphossugar_trans
PFAM:PF03214	PIRSF:PIRSF016429	PANTHER:PTHR31682	PANTHER:PTHR31682:SF15	InterPro:RGP	InterPro:RGP_fam
SUPFAM:SSF53448	UniParc:UPI0002544DFC	:	:	:	:

Description

AT5G15650 (E=4e-212) RGP2, ATRGP2 | RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2); transferase, transferring hexosyl groups

Coordinates

chrA10:-:13374002..13375461

Molecular Weight (calculated)

40643.1 Da

IEP (calculated)

5.697

GRAVY (calculated)

-0.187

Length

357 amino acids

Sequence
(BLAST)

001: MVDPANTVGI PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPTKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPA GKAVNALEQH IKNLLCPSTP WFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNARYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL GLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEDIIPFF
301: QNVKLSKEAT TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPATA

Best Arabidopsis Sequence Match ( AT5G15650.1 )
(BLAST)

001: MVEPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPSKKIH VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMV
101: SKKKYIFTID DDCFVAKDPS GKAVNALEQH IKNLLCPSSP FFFNTLYDPY REGADFVRGY PFSLREGVST AVSHGLWLNI PDYDAPTQLV KPKERNTRYV
201: DAVMTIPKGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP IGRYDDMWAG WCIKVICDHL SLGVKTGLPY IYHSKASNPF VNLKKEYKGI FWQEEIIPFF
301: QNAKLSKEAV TVQQCYIELS KMVKEKLSSL DPYFDKLADA MVTWIEAWDE LNPPAASGKA

Arabidopsis Description

RGP2RGP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UG61]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.